8TOH

Cryo-EM structure of monomeric alpha-Klotho

PDB DOI: https://doi.org/10.2210/pdb8TOH/pdb
EM Map EMD-41452: EMDB EMDataResource

Classification: SIGNALING PROTEIN
Organism(s): Homo sapiens
Expression System: Mus musculus
Mutation(s): No

Deposited: 2023-08-03 Released: 2024-08-14
Deposition Author(s): Schnicker, N.J., Xu, Z., Mohammad, A., Gakhar, L., Huang, C.L.
Funding Organization(s): National Institutes of Health/National Institute of Diabetes and Digestive and Kidney Disease (NIH/NIDDK)

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.29 Å
Aggregation State: PARTICLE
Reconstruction Method: SINGLE PARTICLE

Starting Model: experimental
View more details

wwPDB Validation 3D Report Full Report

This is version 1.0 of the entry. See complete history.

Literature

Exploring the a-Klotho conformational landscape

Schnicker, N.J., Xu, Z., Mohammad, A., Gakhar, L., Huang, C.L.

To be published.

Macromolecule Content

Total Structure Weight: 109.99 kDa
Atom Count: 7,022
Modelled Residue Count: 860
Deposited Residue Count: 954
Unique protein chains: 1

Macromolecules

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(by identity cutoff) | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Klotho	A	954	Homo sapiens	Mutation(s): 0 Gene Names: KL
UniProt & NIH Common Fund Data Resources
Find proteins for Q9UEF7 (Homo sapiens) Explore Q9UEF7 Go to UniProtKB: Q9UEF7
PHAROS: Q9UEF7 GTEx: ENSG00000133116
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	Q9UEF7
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: ELECTRON MICROSCOPY
Resolution: 3.29 Å
Aggregation State: PARTICLE
Reconstruction Method: SINGLE PARTICLE

EM Software:

Task	Software Package	Version
MODEL REFINEMENT	PHENIX

Structure Validation

View Full Validation Report

Entry History & Funding Information

Deposition Data

Released Date: 2024-08-14

Deposition Author(s):

Schnicker, N.J.

Funding Organization	Location	Grant Number
National Institutes of Health/National Institute of Diabetes and Digestive and Kidney Disease (NIH/NIDDK)	United States	RO1 DK100605

Revision History (Full details and data files)

Version 1.0: 2024-08-14
Type: Initial release

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.