8TCH

Initiation of replication protein with helicase activity encoded by Pathogenicity Island SaPIBov1

PDB DOI: https://doi.org/10.2210/pdb8TCH/pdb

Classification: REPLICATION
Organism(s): Staphylococcus aureus
Expression System: Escherichia coli
Mutation(s): No

Deposited: 2023-07-01 Released: 2024-07-03
Deposition Author(s): Mir-Sanchis, I., Rice, P.
Funding Organization(s): National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID)

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.70 Å
R-Value Free: 0.281
R-Value Work: 0.265
R-Value Observed: 0.266

wwPDB Validation 3D Report Full Report

This is version 1.0 of the entry. See complete history.

Literature

Initiation of replication protein with helicase activity encoded by Pathogenicity Island SaPIBov1

Mir-Sanchis, I., Rice, P.

To be published.

Macromolecule Content

Total Structure Weight: 132.2 kDa
Atom Count: 7,903
Modelled Residue Count: 971
Deposited Residue Count: 1,160
Unique protein chains: 1

Macromolecules

Find similar proteins by:

(by identity cutoff) | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Pathogenicity island protein	A, B	580	Staphylococcus aureus	Mutation(s): 0 Gene Names: NCTC7878_00445
UniProt
Find proteins for A0A2X2JYA8 (Staphylococcus aureus) Explore A0A2X2JYA8 Go to UniProtKB: A0A2X2JYA8
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	A0A2X2JYA8
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 2.70 Å
R-Value Free: 0.281
R-Value Work: 0.265
R-Value Observed: 0.266
Space Group: H 3

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 115.408	α = 90
b = 115.408	β = 90
c = 310.687	γ = 120

Software Package:

Software Name	Purpose
PHENIX	refinement
HKL-2000	data scaling
HKL-2000	data reduction
SOLVE	phasing

Structure Validation

View Full Validation Report

Entry History & Funding Information

Deposition Data

Released Date: 2024-07-03

Deposition Author(s):

Mir-Sanchis, I.

Funding Organization	Location	Grant Number
National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID)	United States	--

Revision History (Full details and data files)

Version 1.0: 2024-07-03
Type: Initial release

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.