Citrobacter rodentium contact dependent growth inhibition (CDI) entry and toxin (CdiA-CT) domains
Cuthbert, B.J., Goulding, C.W., Hayes, C.S., Nhan, D.Q.To be published.
Experimental Data Snapshot
Starting Models: experimental, in silico
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wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Contact-dependent inhibitor A | 318 | Citrobacter rodentium | Mutation(s): 1  Gene Names: stbD, E2R62_11320 | ![]() | |
UniProt | |||||
Find proteins for A0A482PFX0 (Citrobacter rodentium) Explore A0A482PFX0  Go to UniProtKB:  A0A482PFX0 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | A0A482PFX0 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 4 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
SO4 Query on SO4 | BA [auth C], E [auth A], J [auth A], R [auth C] | SULFATE ION O4 S QAOWNCQODCNURD-UHFFFAOYSA-L | |||
GOL Query on GOL | AA [auth C] F [auth A] FA [auth D] GA [auth D] H [auth A] | GLYCEROL C3 H8 O3 PEDCQBHIVMGVHV-UHFFFAOYSA-N | |||
ACT Query on ACT | DA [auth D] EA [auth D] G [auth A] I [auth A] JA [auth D] | ACETATE ION C2 H3 O2 QTBSBXVTEAMEQO-UHFFFAOYSA-M | |||
CA Query on CA | CA [auth C], K [auth A], KA [auth D], Q [auth B] | CALCIUM ION Ca BHPQYMZQTOCNFJ-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
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a = 66.87 | α = 90 |
b = 113.982 | β = 92.39 |
c = 87.351 | γ = 90 |
Software Name | Purpose |
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PHENIX | refinement |
XDS | data reduction |
XSCALE | data scaling |
PHASER | phasing |
Coot | model building |
Funding Organization | Location | Grant Number |
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National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID) | United States | -- |