8RAJ

NMR structure of PKS docking domains

• PDB DOI: https://doi.org/10.2210/pdb8RAJ/pdb
• BMRB: 34886

• Classification: PROTEIN BINDING
• Organism(s): Methylorubrum extorquens AM1
• Expression System: Escherichia coli
• Mutation(s): No 


• Deposited: 2023-12-01 Released: 2024-06-05 
• Deposition Author(s): Scat, S., Weissman, K.J., Chagot, B.
• Funding Organization(s): Centre National de la Recherche Scientifique (CNRS)

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Experimental Data Snapshot

• Method: SOLUTION NMR
• Conformers Calculated: 200 
• Conformers Submitted: 20 
• Selection Criteria: structures with the least restraint violations 

Literature

Insights into docking in megasynthases from investigation of the toblerol trans-AT polyketide synthase: many alpha-helical means to an end

Scat, S., Weissman, K., Chagot, B.

(2024) RSC Chem Biol 

• DOI: https://doi.org/10.1039/D4CB00075G

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Hetero 2-mer - A1B1 

Biological assembly 1 assigned by authors and generated by (software)

Biological Assembly Evidence: NMR Distance Restraints

Macromolecule Content

• Total Structure Weight: 11.68 kDa 
• Atom Count: 816 
• Modelled Residue Count: 111 
• Deposited Residue Count: 111 
• Unique protein chains: 2

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Beta-ketoacyl synthase	A	62	Methylorubrum extorquens AM1	Mutation(s): 0  Gene Names: MexAM1_META2p0008
UniProt
Find proteins for C5B3B7 (Methylorubrum extorquens (strain ATCC 14718 / DSM 1338 / JCM 2805 / NCIMB 9133 / AM1)) Explore C5B3B7  Go to UniProtKB:  C5B3B7

Entity ID: 2
Molecule	Chains	Sequence Length	Organism	Details	Image
Trimethylamine monooxygenase	B	49	Methylorubrum extorquens AM1	Mutation(s): 0  Gene Names: MexAM1_META2p0010
UniProt
Find proteins for C5B3B9 (Methylorubrum extorquens (strain ATCC 14718 / DSM 1338 / JCM 2805 / NCIMB 9133 / AM1)) Explore C5B3B9  Go to UniProtKB:  C5B3B9

Experimental Data & Validation

Experimental Data

• Method: SOLUTION NMR
• Conformers Calculated: 200 
• Conformers Submitted: 20 
• Selection Criteria: structures with the least restraint violations 

Structure Validation

Entry History & Funding Information

Deposition Data

• Released Date: 2024-06-05 
Deposition Author(s): Scat, S., Weissman, K.J., Chagot, B.

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Funding Organization	Location	Grant Number
Centre National de la Recherche Scientifique (CNRS)	France	--

Revision History  

• Version 1.0: 2024-06-05
  Type: Initial release