8QO1

Asymmetric structure of the Borrelia bacteriophage BB1 procapsid, 3D class 3

PDB DOI: https://doi.org/10.2210/pdb8QO1/pdb
EM Map EMD-18519: EMDB EMDataResource

Classification: VIRAL PROTEIN
Organism(s): Borreliella burgdorferi B31
Expression System: Escherichia coli BL21
Mutation(s): No

Deposited: 2023-10-11 Released: 2023-12-27
Deposition Author(s): Rumnieks, J., Fuzik, T., Tars, K.
Funding Organization(s): European Regional Development Fund, iNEXT-Discovery

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 9.76 Å
Aggregation State: PARTICLE
Reconstruction Method: SINGLE PARTICLE

Starting Model: experimental
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This is version 1.0 of the entry. See complete history.

Literature

Structure of the Borrelia Bacteriophage phi BB1 Procapsid.

Rumnieks, J., Fuzik, T., Tars, K.

(2023) J Mol Biol 435: 168323-168323

PubMed: 37866476 Search on PubMed
DOI: https://doi.org/10.1016/j.jmb.2023.168323
Primary Citation of Related Structures:
8PHO, 8PHP, 8PHQ, 8PHR, 8PHS, 8PHT, 8PHU, 8PKH, 8QO0, 8QO1

PubMed Abstract:
Bacteriophages of Borrelia burgdorferi are a biologically important but under-investigated feature of the Lyme disease-causing spirochete. No virulent borrelial viruses have been identified, but all B. burgdorferi isolates carry a prophage φBB1 as resident circular plasmids. Like its host, the φBB1 phage is quite distinctive and shares little sequence similarity with other known bacteriophages. We expressed φBB1 head morphogenesis proteins in Escherichia coli which resulted in assembly of homogeneous prolate procapsid structures and used cryo-electron microscopy to determine the three-dimensional structure of these particles. The φBB1 procapsids consist of 415 copies of the major capsid protein and an equal combined number of three homologous capsid decoration proteins that form trimeric knobs on the outside of the particle. One of the end vertices of the particle is occupied by a portal assembled from twelve copies of the portal protein. The φBB1 scaffolding protein is entirely α-helical and has an elongated shape with a small globular domain in the middle. Within the tubular section of the procapsid, the internal scaffold is built of stacked rings, each composed of 32 scaffolding protein molecules, which run in opposite directions from both caps with a heterogeneous part in the middle. Inside the portal-containing cap, the scaffold is organized asymmetrically with ten scaffolding protein molecules bound to the portal. The φBB1 procapsid structure provides better insight into the vast structural diversity of bacteriophages and presents clues of how elongated bacteriophage particles might be assembled.

Organizational Affiliation

Latvian Biomedical Research and Study Center, Rātsupītes 1, 1067 Riga, Latvia. Electronic address: j.rumnieks@biomed.lu.lv.

Macromolecule Content

Total Structure Weight: 46,187.45 kDa
Atom Count: 2,050,193
Modelled Residue Count: 256,313
Deposited Residue Count: 405,019
Unique protein chains: 6

Macromolecules

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(by identity cutoff) | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Cytosolic protein	A [auth AA] AA [auth Aa] AB [auth BA] AC [auth Ba] ACA [auth Oa] A [auth AA], AA [auth Aa], AB [auth BA], AC [auth Ba], ACA [auth Oa], ADA [auth PA], AEA [auth Pa], AJ [auth FA], AK [auth Fa], AL [auth GA], AMA [auth Ta], ANA [auth UA], AOA [auth Ua], AT [auth KA], AU [auth Ka], AV [auth LA], B [auth AB], BA [auth Ab], BB, BC [auth Bb], BCA [auth Ob], BDA [auth PB], BEA [auth Pb], BJ [auth FB], BK [auth Fb], BL [auth GB], BMA [auth Tb], BNA [auth UB], BOA [auth Ub], BT [auth KB], BU [auth Kb], BV [auth LB], C [auth AC], CA [auth Ac], CB [auth BC], CC [auth Bc], CCA [auth Oc], CDA [auth PC], CEA [auth Pc], CJ [auth FC], CK [auth Fc], CL [auth GC], CMA [auth Tc], CNA [auth UC], COA [auth Uc], CT [auth KC], CU [auth Kc], CV [auth LC], D [auth AD], DA [auth Ad], DB [auth BD], DC [auth Bd], DCA [auth Od], DDA [auth PD], DEA [auth Pd], DJ [auth FD], DK [auth Fd], DL [auth GD], DMA [auth Td], DNA [auth UD], DOA [auth Ud], DT [auth KD], DU [auth Kd], DV [auth LD], E [auth AE], EA [auth Ae], EB [auth BE], EC [auth Be], ECA [auth Oe], EDA [auth PE], EEA [auth Pe], EJ [auth FE], EK [auth Fe], EL [auth GE], EMA [auth Te], ENA [auth UE], EOA [auth Ue], ES [auth Je], ET [auth KE], EU [auth Ke], EV [auth LE], F [auth AF], FA [auth Af], FB [auth BF], FCA [auth Of], FDA [auth PF], FEA [auth Pf], FJ [auth FF], FK [auth Ff], FL [auth GF], FMA [auth Tf], FNA [auth UF], FOA [auth Uf], FS [auth Jf], FT [auth KF], FU [auth Kf], FV [auth LF], G [auth AG], GA [auth Ag], GB [auth BG], GCA [auth Og], GDA [auth PG], GEA [auth Pg], GJ [auth FG], GK [auth Fg], GL [auth GG], GMA [auth Tg], GNA [auth UG], GOA [auth Ug], GS [auth Jg], GT [auth KG], GU [auth Kg], GV [auth LG], H [auth AH], HA [auth Ah], HB [auth BH], HCA [auth Oh], HDA [auth PH], HEA [auth Ph], HJ [auth FH], HK [auth Fh], HL [auth GH], HMA [auth Th], HNA [auth UH], HOA [auth Uh], HS [auth Jh], HT [auth KH], HU [auth Kh], HV [auth LH], I [auth AI], IA [auth Ai], IB [auth BI], ICA [auth Oi], IDA [auth PI], IEA [auth Pi], IJ [auth FI], IK [auth Fi], IL [auth GI], ILA [auth TI], IMA [auth Ti], INA [auth UI], IOA [auth Ui], IS [auth Ji], IT [auth KI], IU [auth Ki], IV [auth LI], J [auth AJ], JA [auth Aj], JB [auth BJ], JCA [auth Oj], JDA [auth PJ], JEA [auth Pj], JJ [auth FJ], JK [auth Fj], JL [auth GJ], JLA [auth TJ], JMA [auth Tj], JNA [auth UJ], JOA [auth Uj], JS [auth Jj], JT [auth KJ], JU [auth Kj], K [auth AK], KA [auth Ak], KB [auth BK], KCA [auth Ok], KDA [auth PK], KEA [auth Pk], KJ [auth FK], KK [auth Fk], KL [auth GK], KLA [auth TK], KMA [auth Tk], KNA [auth UK], KOA [auth Uk], KS [auth Jk], KT [auth KK], KU [auth Kk], L [auth AL], LA [auth Al], LB [auth BL], LCA [auth Ol], LDA [auth PL], LEA [auth Pl], LJ [auth FL], LK [auth Fl], LL [auth GL], LLA [auth TL], LMA [auth Tl], LNA [auth UL], LOA [auth Ul], LS [auth Jl], LT [auth KL], LU [auth Kl], M [auth AM], MA [auth Am], MB [auth BM], MCA [auth Om], MDA [auth PM], MEA [auth Pm], MJ [auth FM], MK [auth Fm], ML [auth GM], MLA [auth TM], MMA [auth Tm], MNA [auth UM], MOA [auth Um], MS [auth Jm], MT [auth KM], MU [auth Km], N [auth AN], NA [auth An], NB [auth BN], NCA [auth On], NDA [auth PN], NEA [auth Pn], NJ [auth FN], NK [auth Fn], NL [auth GN], NLA [auth TN], NMA [auth Tn], NNA [auth UN], NS [auth Jn], NT [auth KN], NU [auth Kn], O [auth AO], OA [auth Ao], OB [auth BO], OCA [auth Oo], ODA [auth PO], OEA [auth Po], OJ [auth FO], OK [auth Fo], OL [auth GO], OLA [auth TO], OMA [auth To], ONA [auth UO], OS [auth Jo], OT [auth KO], OU [auth Ko], P [auth AP], PA [auth Ap], PB [auth BP], PCA [auth Op], PDA [auth PP], PEA [auth Pp], PI [auth Ep], PJ [auth FP], PK [auth Fp], PL [auth GP], PLA [auth TP], PMA [auth Tp], PNA [auth UP], PS [auth Jp], PT [auth KP], PU [auth Kp], Q [auth AQ], QA [auth Aq], QB [auth BQ], QCA [auth Oq], QDA [auth PQ], QEA [auth Pq], QI [auth Eq], QJ [auth FQ], QK [auth Fq], QL [auth GQ], QLA [auth TQ], QMA [auth Tq], QNA [auth UQ], QS [auth Jq], QT [auth KQ], QU [auth Kq], R [auth AR], RA [auth Ar], RB [auth BR], RCA [auth Or], RDA [auth PR], REA [auth Pr], RI [auth Er], RJ [auth FR], RK [auth Fr], RL [auth GR], RLA [auth TR], RMA [auth Tr], RNA [auth UR], RS [auth Jr], RT [auth KR], RU [auth Kr], S [auth AS], SA [auth As], SB [auth BS], SCA [auth Os], SDA [auth PS], SEA [auth Ps], SI [auth Es], SJ [auth FS], SK [auth Fs], SL [auth GS], SLA [auth TS], SMA [auth Ts], SNA [auth US], SS [auth Js], ST [auth KS], SU [auth Ks], T [auth AT], TA [auth At], TB [auth BT], TBA [auth OT], TCA [auth Ot], TDA [auth PT], TEA [auth Pt], TI [auth Et], TJ [auth FT], TK [auth Ft], TL [auth GT], TLA [auth TT], TMA [auth Tt], TNA [auth UT], TS [auth Jt], TT [auth KT], TU [auth Kt], U [auth AU], UA [auth Au], UB [auth BU], UBA [auth OU], UCA [auth Ou], UDA [auth PU], UEA [auth Pu], UI [auth Eu], UJ [auth FU], UK [auth Fu], ULA [auth TU], UMA [auth Tu], UNA [auth UU], US [auth Ju], UT [auth KU], UU [auth Ku], V [auth AV], VA [auth Av], VB [auth BV], VBA [auth OV], VCA [auth Ov], VDA [auth PV], VEA [auth Pv], VI [auth Ev], VJ [auth FV], VK [auth Fv], VLA [auth TV], VMA [auth Tv], VNA [auth UV], VS [auth Jv], VT [auth KV], VU [auth Kv], W [auth AW], WA [auth Aw], WB [auth BW], WBA [auth OW], WCA [auth Ow], WDA [auth PW], WEA [auth Pw], WI [auth Ew], WJ [auth FW], WK [auth Fw], WLA [auth TW], WMA [auth Tw], WNA [auth UW], WS [auth Jw], WT [auth KW], WU [auth Kw], X [auth AX], XA [auth Ax], XB [auth BX], XBA [auth OX], XCA [auth Ox], XDA [auth PX], XEA [auth Px], XI [auth Ex], XJ [auth FX], XK [auth Fx], XLA [auth TX], XMA [auth Tx], XNA [auth UX], XS [auth Jx], XT [auth KX], XU [auth Kx], Y [auth AY], YA [auth Ay], YB [auth BY], YBA [auth OY], YCA [auth Oy], YDA [auth PY], YI [auth Ey], YJ [auth FY], YK [auth Fy], YLA [auth TY], YMA [auth Ty], YNA [auth UY], YS [auth Jy], YT [auth KY], YU [auth Ky], Z [auth AZ], ZA [auth Az], ZB [auth BZ], ZBA [auth OZ], ZCA [auth Oz], ZDA [auth PZ], ZI [auth Ez], ZJ [auth FZ], ZK [auth Fz], ZLA [auth TZ], ZMA [auth Tz], ZNA [auth UZ], ZS [auth Jz], ZT [auth KZ], ZU [auth Kz]	319	Borreliella burgdorferi B31	Mutation(s): 0 Gene Names: BB_L06
UniProt
Find proteins for Q9R3U6 (Borreliella burgdorferi (strain ATCC 35210 / DSM 4680 / CIP 102532 / B31)) Explore Q9R3U6 Go to UniProtKB: Q9R3U6
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	Q9R3U6
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Reference Sequence

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Entity ID: 2
Molecule	Chains	Sequence Length	Organism	Details	Image
Decoration protein P03	AD [auth CA] AE [auth Ca] AFA [auth QA] AGA [auth Qa] AHA [auth RA] AD [auth CA], AE [auth Ca], AFA [auth QA], AGA [auth Qa], AHA [auth RA], AM [auth Ga], AN [auth HA], APA [auth VA], AQA [auth Va], AW [auth La], AX [auth MA], BD [auth CB], BE [auth Cb], BFA [auth QB], BGA [auth Qb], BHA [auth RB], BM [auth Gb], BN [auth HB], BPA [auth VB], BQA [auth Vb], BW [auth Lb], BX [auth MB], CD [auth CC], CE [auth Cc], CFA [auth QC], CGA [auth Qc], CM [auth Gc], CN [auth HC], CPA [auth VC], CQA [auth Vc], CW [auth Lc], CX [auth MC], DD [auth CD], DE [auth Cd], DFA [auth QD], DGA [auth Qd], DM [auth Gd], DN [auth HD], DPA [auth VD], DQA [auth Vd], DW [auth Ld], DX [auth MD], ED [auth CE], EE [auth Ce], EFA [auth QE], EGA [auth Qe], EM [auth Ge], EN [auth HE], EPA [auth VE], EQA [auth Ve], EW [auth Le], EX [auth ME], FC [auth Bf], FD [auth CF], FE [auth Cf], FFA [auth QF], FGA [auth Qf], FM [auth Gf], FN [auth HF], FPA [auth VF], FQA [auth Vf], FW [auth Lf], FX [auth MF], GC [auth Bg], GD [auth CG], GE [auth Cg], GFA [auth QG], GGA [auth Qg], GM [auth Gg], GN [auth HG], GPA [auth VG], GQA [auth Vg], GW [auth Lg], GX [auth MG], HC [auth Bh], HD [auth CH], HE [auth Ch], HFA [auth QH], HGA [auth Qh], HM [auth Gh], HN [auth HH], HPA [auth VH], HQA [auth Vh], HW [auth Lh], HX [auth MH], IC [auth Bi], ID [auth CI], IE [auth Ci], IFA [auth QI], IGA [auth Qi], IM [auth Gi], IN [auth HI], IPA [auth VI], IQA [auth Vi], IW [auth Li], IX [auth MI], JC [auth Bj], JD [auth CJ], JFA [auth QJ], JGA [auth Qj], JM [auth Gj], JN [auth HJ], JPA [auth VJ], JQA [auth Vj], JV [auth LJ], JW [auth Lj], JX [auth MJ], KC [auth Bk], KD [auth CK], KFA [auth QK], KGA [auth Qk], KM [auth Gk], KN [auth HK], KPA [auth VK], KQA [auth Vk], KV [auth LK], KW [auth Lk], KX [auth MK], LC [auth Bl], LD [auth CL], LFA [auth QL], LGA [auth Ql], LM [auth Gl], LN [auth HL], LPA [auth VL], LQA [auth Vl], LV [auth LL], LW [auth Ll], LX [auth ML], MC [auth Bm], MD [auth CM], MFA [auth QM], MGA [auth Qm], MM [auth Gm], MN [auth HM], MPA [auth VM], MQA [auth Vm], MV [auth LM], MW [auth Lm], MX [auth MM], NC [auth Bn], ND [auth CN], NFA [auth QN], NGA [auth Qn], NM [auth Gn], NN [auth HN], NOA [auth Un], NPA [auth VN], NQA [auth Vn], NV [auth LN], NW [auth Ln], OC [auth Bo], OD [auth CO], OFA [auth QO], OGA [auth Qo], OM [auth Go], ON [auth HO], OOA [auth Uo], OPA [auth VO], OQA [auth Vo], OV [auth LO], OW [auth Lo], PC [auth Bp], PD [auth CP], PFA [auth QP], PGA [auth Qp], PM [auth Gp], PN [auth HP], POA [auth Up], PPA [auth VP], PQA [auth Vp], PV [auth LP], PW [auth Lp], QC [auth Bq], QD [auth CQ], QFA [auth QQ], QGA [auth Qq], QM [auth Gq], QN [auth HQ], QOA [auth Uq], QPA [auth VQ], QQA [auth Vq], QV [auth LQ], QW [auth Lq], RC [auth Br], RD [auth CR], RFA [auth QR], RGA [auth Qr], RM [auth Gr], RN [auth HR], ROA [auth Ur], RPA [auth VR], RV [auth LR], RW [auth Lr], SC [auth Bs], SD [auth CS], SFA [auth QS], SGA [auth Qs], SM [auth Gs], SN [auth HS], SOA [auth Us], SPA [auth VS], SV [auth LS], SW [auth Ls], TC [auth Bt], TD [auth CT], TFA [auth QT], TGA [auth Qt], TM [auth Gt], TN [auth HT], TOA [auth Ut], TPA [auth VT], TV [auth LT], TW [auth Lt], UC [auth Bu], UD [auth CU], UFA [auth QU], UGA [auth Qu], UL [auth GU], UM [auth Gu], UN [auth HU], UOA [auth Uu], UPA [auth VU], UV [auth LU], UW [auth Lu], VC [auth Bv], VD [auth CV], VFA [auth QV], VGA [auth Qv], VL [auth GV], VM [auth Gv], VN [auth HV], VOA [auth Uv], VPA [auth VV], VV [auth LV], VW [auth Lv], WC [auth Bw], WD [auth CW], WFA [auth QW], WGA [auth Qw], WL [auth GW], WM [auth Gw], WN [auth HW], WOA [auth Uw], WPA [auth VW], WV [auth LW], WW [auth Lw], XC [auth Bx], XD [auth CX], XFA [auth QX], XGA [auth Qx], XL [auth GX], XM [auth Gx], XN [auth HX], XOA [auth Ux], XPA [auth VX], XV [auth LX], XW [auth Lx], YC [auth By], YD [auth CY], YEA [auth Py], YFA [auth QY], YGA [auth Qy], YL [auth GY], YM [auth Gy], YOA [auth Uy], YPA [auth VY], YV [auth LY], YW [auth Ly], ZC [auth Bz], ZD [auth CZ], ZEA [auth Pz], ZFA [auth QZ], ZGA [auth Qz], ZL [auth GZ], ZM [auth Gz], ZOA [auth Uz], ZPA [auth VZ], ZV [auth LZ], ZW [auth Lz]	185	Borreliella burgdorferi B31	Mutation(s): 0 Gene Names: BB_L03
UniProt
Find proteins for Q9R2Q0 (Borreliella burgdorferi (strain ATCC 35210 / DSM 4680 / CIP 102532 / B31)) Explore Q9R2Q0 Go to UniProtKB: Q9R2Q0
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	Q9R2Q0
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Reference Sequence

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Entity ID: 3
Molecule	Chains	Sequence Length	Organism	Details	Image
Decoration protein P04	CHA [auth RC], JE [auth Cj], NX [auth MN], RQA [auth Vr], YN [auth HY]	254	Borreliella burgdorferi B31	Mutation(s): 0 Gene Names: BB_L04
UniProt
Find proteins for Q9R3E0 (Borreliella burgdorferi (strain ATCC 35210 / DSM 4680 / CIP 102532 / B31)) Explore Q9R3E0 Go to UniProtKB: Q9R3E0
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	Q9R3E0
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Reference Sequence

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Entity ID: 4
Molecule	Chains	Sequence Length	Organism	Details	Image
DUF228 domain-containing protein	AF [auth DA] AIA [auth Ra] AO [auth Ha] ARA [auth WA] AY [auth Ma] AF [auth DA], AIA [auth Ra], AO [auth Ha], ARA [auth WA], AY [auth Ma], BF [auth DB], BIA [auth Rb], BO [auth Hb], BRA [auth WB], BY [auth Mb], CF [auth DC], CIA [auth Rc], CO [auth Hc], CRA [auth WC], CY [auth Mc], DF [auth DD], DHA [auth RD], DO [auth Hd], DRA [auth WD], DY [auth Md], EF [auth DE], EHA [auth RE], EO [auth He], ERA [auth WE], EY [auth Me], FF [auth DF], FHA [auth RF], FO [auth Hf], FRA [auth WF], FY [auth Mf], GF [auth DG], GHA [auth RG], GO [auth Hg], GRA [auth WG], GY [auth Mg], HF [auth DH], HHA [auth RH], HO [auth Hh], HRA [auth WH], HY [auth Mh], IF [auth DI], IHA [auth RI], IO [auth Hi], IRA [auth WI], IY [auth Mi], JF [auth DJ], JHA [auth RJ], JO [auth Hj], JRA [auth WJ], JY [auth Mj], KE [auth Ck], KHA [auth RK], KO [auth Hk], KRA [auth WK], KY [auth Mk], LE [auth Cl], LHA [auth RL], LO [auth Hl], LRA [auth WL], LY [auth Ml], ME [auth Cm], MHA [auth RM], MO [auth Hm], MRA [auth WM], MY [auth Mm], NE [auth Cn], NHA [auth RN], NO [auth Hn], NRA [auth WN], NY [auth Mn], OE [auth Co], OHA [auth RO], OO [auth Ho], ORA [auth WO], OX [auth MO], PE [auth Cp], PHA [auth RP], PO [auth Hp], PRA [auth WP], PX [auth MP], QE [auth Cq], QHA [auth RQ], QO [auth Hq], QRA [auth WQ], QX [auth MQ], RE [auth Cr], RHA [auth RR], RO [auth Hr], RRA [auth WR], RX [auth MR], SE [auth Cs], SHA [auth RS], SO [auth Hs], SQA [auth Vs], SX [auth MS], TE [auth Ct], THA [auth RT], TO [auth Ht], TQA [auth Vt], TX [auth MT], UE [auth Cu], UHA [auth RU], UO [auth Hu], UQA [auth Vu], UX [auth MU], VE [auth Cv], VHA [auth RV], VO [auth Hv], VQA [auth Vv], VX [auth MV], WE [auth Cw], WHA [auth RW], WO [auth Hw], WQA [auth Vw], WX [auth MW], XE [auth Cx], XHA [auth RX], XO [auth Hx], XQA [auth Vx], XX [auth MX], YE [auth Cy], YHA [auth RY], YO [auth Hy], YQA [auth Vy], YX [auth MY], ZE [auth Cz], ZHA [auth RZ], ZN [auth HZ], ZQA [auth Vz], ZX [auth MZ]	190	Borreliella burgdorferi B31	Mutation(s): 0 Gene Names: BbuZS7_P05
UniProt
Find proteins for A0A0H3BZR0 (Borreliella burgdorferi (strain ZS7)) Explore A0A0H3BZR0 Go to UniProtKB: A0A0H3BZR0
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	A0A0H3BZR0
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Entity ID: 5
Molecule	Chains	Sequence Length	Organism	Details	Image
Scaffold protein	AAA [auth Na] AAB [auth aa] ABA [auth OA] ABB [auth bA] ACB [auth ba] AAA [auth Na], AAB [auth aa], ABA [auth OA], ABB [auth bA], ACB [auth ba], ADB [auth cA], AEB [auth ca], AFB [auth dA], AG [auth Da], AGB [auth da], AH [auth EA], AHB [auth eA], AI [auth Ea], AIB [auth ea], AJA [auth SA], AJB [auth fA], AKA [auth Sa], AKB [auth fa], ALA [auth TA], ALB [auth gA], AP [auth IA], AQ [auth Ia], AR [auth JA], AS [auth Ja], ASA [auth Wa], ATA [auth XA], AUA [auth Xa], AWA [auth Ya], AXA [auth ZA], AYA [auth Za], AZ [auth NA], AZA [auth aA], BAA [auth Nb], BAB [auth ab], BBA [auth OB], BBB [auth bB], BCB [auth bb], BDB [auth cB], BEB [auth cb], BFB [auth dB], BG [auth Db], BGB [auth db], BH [auth EB], BHB [auth eB], BI [auth Eb], BIB [auth eb], BJA [auth SB], BJB [auth fB], BKA [auth Sb], BKB [auth fb], BLA [auth TB], BLB [auth gB], BP [auth IB], BQ [auth Ib], BR [auth JB], BS [auth Jb], BSA [auth Wb], BTA [auth XB], BUA [auth Xb], BWA [auth Yb], BXA [auth ZB], BYA [auth Zb], BZ [auth NB], BZA [auth aB], CAA [auth Nc], CAB [auth ac], CBA [auth OC], CBB [auth bC], CCB [auth bc], CDB [auth cC], CEB [auth cc], CFB [auth dC], CG [auth Dc], CGB [auth dc], CH [auth EC], CHB [auth eC], CI [auth Ec], CIB [auth ec], CJA [auth SC], CJB [auth fC], CKA [auth Sc], CKB [auth fc], CLA [auth TC], CLB [auth gC], CP [auth IC], CQ [auth Ic], CR [auth JC], CS [auth Jc], CSA [auth Wc], CTA [auth XC], CUA [auth Xc], CWA [auth Yc], CXA [auth ZC], CYA [auth Zc], CZ [auth NC], CZA [auth aC], DAA [auth Nd], DAB [auth ad], DBA [auth OD], DBB [auth bD], DCB [auth bd], DDB [auth cD], DEB [auth cd], DFB [auth dD], DG [auth Dd], DGB [auth dd], DH [auth ED], DHB [auth eD], DI [auth Ed], DIA [auth Rd], DIB [auth ed], DJA [auth SD], DJB [auth fD], DKA [auth Sd], DKB [auth fd], DLA [auth TD], DLB [auth gD], DP [auth ID], DQ [auth Id], DR [auth JD], DS [auth Jd], DSA [auth Wd], DTA [auth XD], DUA [auth Xd], DWA [auth Yd], DXA [auth ZD], DYA [auth Zd], DZ [auth ND], DZA [auth aD], EAA [auth Ne], EAB [auth ae], EBA [auth OE], EBB [auth bE], ECB [auth be], EDB [auth cE], EEB [auth ce], EFB [auth dE], EG [auth De], EGB [auth de], EH [auth EE], EHB [auth eE], EI [auth Ee], EIA [auth Re], EIB [auth ee], EJA [auth SE], EJB [auth fE], EKA [auth Se], EKB [auth fe], ELA [auth TE], EP [auth IE], EQ [auth Ie], ER [auth JE], ESA [auth We], ETA [auth XE], EUA [auth Xe], EWA [auth Ye], EXA [auth ZE], EYA [auth Ze], EZ [auth NE], EZA [auth aE], FAA [auth Nf], FAB [auth af], FBA [auth OF], FBB [auth bF], FCB [auth bf], FDB [auth cF], FEB [auth cf], FFB [auth dF], FG [auth Df], FGB [auth df], FH [auth EF], FHB [auth eF], FI [auth Ef], FIA [auth Rf], FIB [auth ef], FJA [auth SF], FJB [auth fF], FKA [auth Sf], FKB [auth ff], FLA [auth TF], FP [auth IF], FQ [auth If], FR [auth JF], FSA [auth Wf], FTA [auth XF], FUA [auth Xf], FWA [auth Yf], FXA [auth ZF], FYA [auth Zf], FZ [auth NF], FZA [auth aF], GAA [auth Ng], GAB [auth ag], GBA [auth OG], GBB [auth bG], GCB [auth bg], GDB [auth cG], GEB [auth cg], GFB [auth dG], GG [auth Dg], GGB [auth dg], GH [auth EG], GHB [auth eG], GI [auth Eg], GIA [auth Rg], GIB [auth eg], GJA [auth SG], GJB [auth fG], GKA [auth Sg], GKB [auth fg], GLA [auth TG], GP [auth IG], GQ [auth Ig], GR [auth JG], GSA [auth Wg], GTA [auth XG], GUA [auth Xg], GWA [auth Yg], GXA [auth ZG], GYA [auth Zg], GZ [auth NG], GZA [auth aG], HAA [auth Nh], HAB [auth ah], HBA [auth OH], HBB [auth bH], HCB [auth bh], HDB [auth cH], HEB [auth ch], HFB [auth dH], HG [auth Dh], HGB [auth dh], HH [auth EH], HHB [auth eH], HI [auth Eh], HIA [auth Rh], HIB [auth eh], HJA [auth SH], HJB [auth fH], HKA [auth Sh], HKB [auth fh], HLA [auth TH], HP [auth IH], HQ [auth Ih], HR [auth JH], HSA [auth Wh], HTA [auth XH], HUA [auth Xh], HWA [auth Yh], HXA [auth ZH], HYA [auth Zh], HZ [auth NH], HZA [auth aH], IAA [auth Ni], IAB [auth ai], IBA [auth OI], IBB [auth bI], ICB [auth bi], IDB [auth cI], IEB [auth ci], IFB [auth dI], IG [auth Di], IGB [auth di], IH [auth EI], IHB [auth eI], II [auth Ei], IIA [auth Ri], IIB [auth ei], IJA [auth SI], IJB [auth fI], IKA [auth Si], IKB [auth fi], IP [auth II], IQ [auth Ii], IR [auth JI], ISA [auth Wi], ITA [auth XI], IUA [auth Xi], IWA [auth Yi], IXA [auth ZI], IYA [auth Zi], IZ [auth NI], IZA [auth aI], JAA [auth Nj], JAB [auth aj], JBA [auth OJ], JBB [auth bJ], JCB [auth bj], JDB [auth cJ], JEB [auth cj], JFB [auth dJ], JG [auth Dj], JGB [auth dj], JH [auth EJ], JHB [auth eJ], JI [auth Ej], JIA [auth Rj], JIB [auth ej], JJA [auth SJ], JJB [auth fJ], JKA [auth Sj], JKB [auth fj], JP [auth IJ], JQ [auth Ij], JR [auth JJ], JSA [auth Wj], JTA [auth XJ], JUA [auth Xj], JVA [auth YJ], JWA [auth Yj], JXA [auth ZJ], JYA [auth Zj], JZ [auth NJ], JZA [auth aJ], KAA [auth Nk], KAB [auth ak], KBA [auth OK], KBB [auth bK], KCB [auth bk], KDB [auth cK], KEB [auth ck], KF [auth DK], KFB [auth dK], KG [auth Dk], KGB [auth dk], KH [auth EK], KHB [auth eK], KI [auth Ek], KIA [auth Rk], KIB [auth ek], KJA [auth SK], KJB [auth fK], KKA [auth Sk], KKB [auth fk], KP [auth IK], KQ [auth Ik], KR [auth JK], KSA [auth Wk], KTA [auth XK], KUA [auth Xk], KVA [auth YK], KWA [auth Yk], KXA [auth ZK], KYA [auth Zk], KZ [auth NK], KZA [auth aK], LAA [auth Nl], LAB [auth al], LBA [auth OL], LBB [auth bL], LCB [auth bl], LDB [auth cL], LEB [auth cl], LF [auth DL], LFB [auth dL], LG [auth Dl], LGB [auth dl], LH [auth EL], LHB [auth eL], LI [auth El], LIA [auth Rl], LIB [auth el], LJA [auth SL], LJB [auth fL], LKA [auth Sl], LKB [auth fl], LP [auth IL], LQ [auth Il], LR [auth JL], LSA [auth Wl], LTA [auth XL], LUA [auth Xl], LVA [auth YL], LWA [auth Yl], LXA [auth ZL], LYA [auth Zl], LZ [auth NL], LZA [auth aL], MAA [auth Nm], MAB [auth am], MBA [auth OM], MBB [auth bM], MCB [auth bm], MDB [auth cM], MEB [auth cm], MF [auth DM], MFB [auth dM], MG [auth Dm], MGB [auth dm], MH [auth EM], MHB [auth eM], MI [auth Em], MIA [auth Rm], MIB [auth em], MJA [auth SM], MJB [auth fM], MKA [auth Sm], MKB [auth fm], MP [auth IM], MQ [auth Im], MR [auth JM], MSA [auth Wm], MTA [auth XM], MUA [auth Xm], MVA [auth YM], MWA [auth Ym], MXA [auth ZM], MYA [auth Zm], MZ [auth NM], MZA [auth aM], NAA [auth Nn], NAB [auth an], NBA [auth ON], NBB [auth bN], NCB [auth bn], NDB [auth cN], NEB [auth cn], NF [auth DN], NFB [auth dN], NG [auth Dn], NGB [auth dn], NH [auth EN], NHB [auth eN], NI [auth En], NIA [auth Rn], NIB [auth en], NJA [auth SN], NJB [auth fN], NKA [auth Sn], NKB [auth fn], NP [auth IN], NQ [auth In], NR [auth JN], NSA [auth Wn], NTA [auth XN], NUA [auth Xn], NVA [auth YN], NWA [auth Yn], NXA [auth ZN], NYA [auth Zn], NZ [auth NN], NZA [auth aN], OAA [auth No], OAB [auth ao], OBA [auth OO], OBB [auth bO], OCB [auth bo], ODB [auth cO], OEB [auth co], OF [auth DO], OFB [auth dO], OG [auth Do], OGB [auth do], OH [auth EO], OHB [auth eO], OI [auth Eo], OIA [auth Ro], OIB [auth eo], OJA [auth SO], OJB [auth fO], OKA [auth So], OKB [auth fo], OP [auth IO], OQ [auth Io], OR [auth JO], OSA [auth Wo], OTA [auth XO], OUA [auth Xo], OVA [auth YO], OWA [auth Yo], OXA [auth ZO], OY [auth Mo], OYA [auth Zo], OZ [auth NO], OZA [auth aO], PAA [auth Np], PAB [auth ap], PBA [auth OP], PBB [auth bP], PCB [auth bp], PDB [auth cP], PEB [auth cp], PF [auth DP], PFB [auth dP], PG [auth Dp], PGB [auth dp], PH [auth EP], PHB [auth eP], PIA [auth Rp], PIB [auth ep], PJA [auth SP], PJB [auth fP], PKA [auth Sp], PKB [auth fp], PP [auth IP], PQ [auth Ip], PR [auth JP], PSA [auth Wp], PTA [auth XP], PUA [auth Xp], PVA [auth YP], PWA [auth Yp], PXA [auth ZP], PY [auth Mp], PYA [auth Zp], PZ [auth NP], PZA [auth aP], QAA [auth Nq], QAB [auth aq], QBA [auth OQ], QBB [auth bQ], QCB [auth bq], QDB [auth cQ], QEB [auth cq], QF [auth DQ], QFB [auth dQ], QG [auth Dq], QGB [auth dq], QH [auth EQ], QHB [auth eQ], QIA [auth Rq], QIB [auth eq], QJA [auth SQ], QJB [auth fQ], QKA [auth Sq], QKB [auth fq], QP [auth IQ], QQ [auth Iq], QR [auth JQ], QSA [auth Wq], QTA [auth XQ], QUA [auth Xq], QVA [auth YQ], QWA [auth Yq], QXA [auth ZQ], QY [auth Mq], QYA [auth Zq], QZ [auth NQ], QZA [auth aQ], RAA [auth Nr], RAB [auth ar], RBA [auth OR], RBB [auth bR], RCB [auth br], RDB [auth cR], REB [auth cr], RF [auth DR], RFB [auth dR], RG [auth Dr], RGB [auth dr], RH [auth ER], RHB [auth eR], RIA [auth Rr], RIB [auth er], RJA [auth SR], RJB [auth fR], RKA [auth Sr], RKB [auth fr], RP [auth IR], RQ [auth Ir], RR [auth JR], RSA [auth Wr], RTA [auth XR], RUA [auth Xr], RVA [auth YR], RWA [auth Yr], RXA [auth ZR], RY [auth Mr], RYA [auth Zr], RZ [auth NR], RZA [auth aR], SAA [auth Ns], SAB [auth as], SBA [auth OS], SBB [auth bS], SCB [auth bs], SDB [auth cS], SEB [auth cs], SF [auth DS], SFB [auth dS], SG [auth Ds], SGB [auth ds], SH [auth ES], SHB [auth eS], SIA [auth Rs], SIB [auth es], SJA [auth SS], SJB [auth fS], SKA [auth Ss], SKB [auth fs], SP [auth IS], SQ [auth Is], SR [auth JS], SRA [auth WS], SSA [auth Ws], STA [auth XS], SUA [auth Xs], SVA [auth YS], SWA [auth Ys], SXA [auth ZS], SY [auth Ms], SYA [auth Zs], SZ [auth NS], SZA [auth aS], TAA [auth Nt], TAB [auth at], TBB [auth bT], TCB [auth bt], TDB [auth cT], TEB [auth ct], TF [auth DT], TFB [auth dT], TG [auth Dt], TGB [auth dt], TH [auth ET], THB [auth eT], TIA [auth Rt], TIB [auth et], TJA [auth ST], TJB [auth fT], TKA [auth St], TKB [auth ft], TP [auth IT], TQ [auth It], TR [auth JT], TRA [auth WT], TSA [auth Wt], TTA [auth XT], TUA [auth Xt], TVA [auth YT], TWA [auth Yt], TXA [auth ZT], TY [auth Mt], TYA [auth Zt], TZ [auth NT], TZA [auth aT], UAA [auth Nu], UAB [auth au], UBB [auth bU], UCB [auth bu], UDB [auth cU], UEB [auth cu], UF [auth DU], UFB [auth dU], UG [auth Du], UGB [auth du], UH [auth EU], UHB [auth eU], UIA [auth Ru], UIB [auth eu], UJA [auth SU], UJB [auth fU], UKA [auth Su], UKB [auth fu], UP [auth IU], UQ [auth Iu], UR [auth JU], URA [auth WU], USA [auth Wu], UTA [auth XU], UUA [auth Xu], UVA [auth YU], UWA [auth Yu], UXA [auth ZU], UY [auth Mu], UYA [auth Zu], UZ [auth NU], UZA [auth aU], VAA [auth Nv], VAB [auth av], VBB [auth bV], VCB [auth bv], VDB [auth cV], VEB [auth cv], VF [auth DV], VFB [auth dV], VG [auth Dv], VGB [auth dv], VH [auth EV], VHB [auth eV], VIA [auth Rv], VIB [auth ev], VJA [auth SV], VJB [auth fV], VKA [auth Sv], VKB [auth fv], VP [auth IV], VQ [auth Iv], VR [auth JV], VRA [auth WV], VSA [auth Wv], VTA [auth XV], VUA [auth Xv], VVA [auth YV], VWA [auth Yv], VXA [auth ZV], VY [auth Mv], VYA [auth Zv], VZ [auth NV], VZA [auth aV], WAA [auth Nw], WAB [auth aw], WBB [auth bW], WCB [auth bw], WDB [auth cW], WEB [auth cw], WF [auth DW], WFB [auth dW], WG [auth Dw], WGB [auth dw], WH [auth EW], WHB [auth eW], WIA [auth Rw], WIB [auth ew], WJA [auth SW], WJB [auth fW], WKA [auth Sw], WKB [auth fw], WP [auth IW], WQ [auth Iw], WR [auth JW], WRA [auth WW], WSA [auth Ww], WTA [auth XW], WUA [auth Xw], WVA [auth YW], WWA [auth Yw], WXA [auth ZW], WY [auth Mw], WYA [auth Zw], WZ [auth NW], WZA [auth aW], XAA [auth Nx], XAB [auth ax], XBB [auth bX], XCB [auth bx], XDB [auth cX], XEB [auth cx], XF [auth DX], XFB [auth dX], XG [auth Dx], XGB [auth dx], XH [auth EX], XHB [auth eX], XIA [auth Rx], XIB [auth ex], XJA [auth SX], XJB [auth fX], XKA [auth Sx], XKB [auth fx], XP [auth IX], XQ [auth Ix], XR [auth JX], XRA [auth WX], XSA [auth Wx], XTA [auth XX], XVA [auth YX], XWA [auth Yx], XXA [auth ZX], XY [auth Mx], XYA [auth Zx], XZ [auth NX], XZA [auth aX], YAA [auth Ny], YAB [auth ay], YBB [auth bY], YCB [auth by], YDB [auth cY], YEB [auth cy], YF [auth DY], YFB [auth dY], YG [auth Dy], YGB [auth dy], YH [auth EY], YHB [auth eY], YIA [auth Ry], YIB [auth ey], YJA [auth SY], YJB [auth fY], YKA [auth Sy], YKB [auth fy], YP [auth IY], YQ [auth Iy], YR [auth JY], YRA [auth WY], YSA [auth Wy], YTA [auth XY], YVA [auth YY], YWA [auth Yy], YXA [auth ZY], YY [auth My], YYA [auth Zy], YZ [auth NY], YZA [auth aY], ZAA [auth Nz], ZAB [auth az], ZBB [auth bZ], ZCB [auth bz], ZDB [auth cZ], ZEB [auth cz], ZF [auth DZ], ZFB [auth dZ], ZG [auth Dz], ZGB [auth dz], ZH [auth EZ], ZHB [auth eZ], ZIA [auth Rz], ZIB [auth ez], ZJA [auth SZ], ZJB [auth fZ], ZKA [auth Sz], ZKB [auth fz], ZO [auth Hz], ZP [auth IZ], ZQ [auth Iz], ZR [auth JZ], ZRA [auth WZ], ZSA [auth Wz], ZTA [auth XZ], ZVA [auth YZ], ZWA [auth Yz], ZXA [auth ZZ], ZY [auth Mz], ZYA [auth Zz], ZZ [auth NZ], ZZA [auth aZ]	230	Borreliella burgdorferi B31	Mutation(s): 0 Gene Names: BB_L02
UniProt
Find proteins for Q9R2Q2 (Borreliella burgdorferi (strain ATCC 35210 / DSM 4680 / CIP 102532 / B31)) Explore Q9R2Q2 Go to UniProtKB: Q9R2Q2
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	Q9R2Q2
Sequence Annotations Expand
Reference Sequence

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(by identity cutoff) | 3D Structure

Entity ID: 6
Molecule	Chains	Sequence Length	Organism	Details	Image
Putative phage portal protein	AVA [auth YA] BVA [auth YB] CVA [auth YC] DVA [auth YD] EVA [auth YE] AVA [auth YA], BVA [auth YB], CVA [auth YC], DVA [auth YD], EVA [auth YE], FVA [auth YF], GVA [auth YG], HVA [auth YH], IVA [auth YI], XUA [auth Xx], YUA [auth Xy], ZUA [auth Xz]	407	Borreliella burgdorferi B31	Mutation(s): 0 Gene Names: BB_L01
UniProt
Find proteins for Q9R3K2 (Borreliella burgdorferi (strain ATCC 35210 / DSM 4680 / CIP 102532 / B31)) Explore Q9R3K2 Go to UniProtKB: Q9R3K2
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	Q9R3K2
Sequence Annotations Expand
Reference Sequence