8QLL

Crystal structure of rat glutathione transferase Omega 1 bound to glutathione


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.40 Å
  • R-Value Free: 0.296 
  • R-Value Work: 0.252 
  • R-Value Observed: 0.254 

Starting Model: experimental
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Literature

Rattus norvegicus Glutathione Transferase Omega 1 Localization in Oral Tissues and Interactions with Food Phytochemicals.

Poirier, N.Menetrier, F.Moreno, J.Boichot, V.Heydel, J.M.Didierjean, C.Canivenc-Lavier, M.C.Canon, F.Neiers, F.Schwartz, M.

(2024) J Agric Food Chem 72: 5887-5897

  • DOI: https://doi.org/10.1021/acs.jafc.4c00483
  • Primary Citation of Related Structures:  
    8QLL

  • PubMed Abstract: 

    Glutathione transferases are xenobiotic-metabolizing enzymes with both glutathione-conjugation and ligandin roles. GSTs are present in chemosensory tissues and fluids of the nasal/oral cavities where they protect tissues from exogenous compounds, including food molecules. In the present study, we explored the presence of the omega-class glutathione transferase (GSTO1) in the rat oral cavity. Using immunohistochemistry, GSTO1 expression was found in taste bud cells of the tongue epithelium and buccal cells of the oral epithelium. Buccal and lingual extracts exhibited thiol-transferase activity (4.9 ± 0.1 and 1.8 ± 0.1 μM/s/mg, respectively). A slight reduction from 4.9 ± 0.1 to 4.2 ± 0.1 μM/s/mg ( p < 0.05; Student's t test) was observed in the buccal extract with 100 μM GSTO1-IN-1, a specific inhibitor of GSTO1. RnGSTO1 exhibited the usual activities of omega GSTs, i . e ., thiol-transferase (catalytic efficiency of 8.9 × 10 4 M -1 ·s -1 ), and phenacyl-glutathione reductase (catalytic efficiency of 8.9 × 10 5 M -1 ·s -1 ) activities, similar to human GSTO1. RnGSTO1 interacts with food phytochemicals, including bitter compounds such as luteolin (K i = 3.3 ± 1.9 μM). Crystal structure analysis suggests that luteolin most probably binds to RnGSTO1 ligandin site. Our results suggest that GSTO1 could interact with food phytochemicals in the oral cavity.


  • Organizational Affiliation

    CSGA, INRAE, CNRS, University of Burgundy, Institut Agro, Dijon 21065, France.


Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Glutathione S-transferase omega-1
A, B
247Rattus norvegicusMutation(s): 0 
Gene Names: Gsto1
UniProt
Find proteins for Q9Z339 (Rattus norvegicus)
Explore Q9Z339 
Go to UniProtKB:  Q9Z339
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ9Z339
Sequence Annotations
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  • Reference Sequence
Small Molecules
Ligands 1 Unique
IDChains Name / Formula / InChI Key2D Diagram3D Interactions
GSH (Subject of Investigation/LOI)
Query on GSH

Download Ideal Coordinates CCD File 
C [auth A],
D [auth B]
GLUTATHIONE
C10 H17 N3 O6 S
RWSXRVCMGQZWBV-WDSKDSINSA-N
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.40 Å
  • R-Value Free: 0.296 
  • R-Value Work: 0.252 
  • R-Value Observed: 0.254 
  • Space Group: I 4
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 133.164α = 90
b = 133.164β = 90
c = 88.514γ = 90
Software Package:
Software NamePurpose
PHENIXrefinement
XDSdata reduction
Aimlessdata scaling
MOLREPphasing

Structure Validation

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Ligand Structure Quality Assessment 


Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
Agence Nationale de la Recherche (ANR)France--

Revision History  (Full details and data files)

  • Version 1.0: 2024-07-31
    Type: Initial release