CryoEM structure of UVSSA(VHS)-CSA-DDB1-DDA1
Lee, S.-H., Sixma, T.K.To be published.
Experimental Data Snapshot
Starting Models: experimental, in silico
View more details
wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
UV-stimulated scaffold protein A | A [auth D] | 729 | Homo sapiens | Mutation(s): 0  Gene Names: UVSSA, KIAA1530 | ![]() |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for Q2YD98 (Homo sapiens) Explore Q2YD98  Go to UniProtKB:  Q2YD98 | |||||
PHAROS:  Q2YD98 GTEx:  ENSG00000163945  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q2YD98 | ||||
Sequence AnnotationsExpand | |||||
|
Entity ID: 2 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
DNA excision repair protein ERCC-8 | B [auth A] | 408 | Homo sapiens | Mutation(s): 0  Gene Names: ERCC8, CKN1, CSA | ![]() |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for Q13216 (Homo sapiens) Explore Q13216  Go to UniProtKB:  Q13216 | |||||
PHAROS:  Q13216 GTEx:  ENSG00000049167  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q13216 | ||||
Sequence AnnotationsExpand | |||||
|
Entity ID: 3 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
DNA damage-binding protein 1 | C [auth B] | 1,160 | Homo sapiens | Mutation(s): 0  Gene Names: DDB1, XAP1 | ![]() |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for Q16531 (Homo sapiens) Explore Q16531  Go to UniProtKB:  Q16531 | |||||
PHAROS:  Q16531 GTEx:  ENSG00000167986  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q16531 | ||||
Sequence AnnotationsExpand | |||||
|
Entity ID: 4 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
DET1- and DDB1-associated protein 1 | D [auth C] | 152 | Homo sapiens | Mutation(s): 0  Gene Names: DDA1, C19orf58, PCIA1 | ![]() |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for Q9BW61 (Homo sapiens) Explore Q9BW61  Go to UniProtKB:  Q9BW61 | |||||
PHAROS:  Q9BW61 GTEx:  ENSG00000130311  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q9BW61 | ||||
Sequence AnnotationsExpand | |||||
|
Task | Software Package | Version |
---|---|---|
MODEL REFINEMENT | PHENIX | |
RECONSTRUCTION | RELION | 3.3.3 |
Funding Organization | Location | Grant Number |
---|---|---|
Netherlands Organisation for Scientific Research (NWO) | Netherlands | TOP 714.017.003 |
European Molecular Biology Organization (EMBO) | European Union | ALTF 1159-2019 |