Targeting a key protein-protein interaction surface on mitogen-activated protein kinases by a Michael acceptor-based cyclic warhead scaffold
Sok, P., Poti, A., Remenyi, A., Soos, T., Balint, D.To be published.
Experimental Data Snapshot
Starting Model: experimental
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Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Mitogen-activated protein kinase 1 | 364 | Homo sapiens | Mutation(s): 0  Gene Names: MAPK1, ERK2, PRKM1, PRKM2 EC: 2.7.11.24 | ||
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P28482 (Homo sapiens) Explore P28482  Go to UniProtKB:  P28482 | |||||
PHAROS:  P28482 GTEx:  ENSG00000100030  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P28482 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 2 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
AN2 Query on AN2 | B [auth A] | AMP PHOSPHORAMIDATE C10 H16 N6 O9 P2 FQMDCEJHLOLKLI-KQYNXXCUSA-N | |||
EI0 (Subject of Investigation/LOI) Query on EI0 | C [auth A] | ~{O}3-~{tert}-butyl ~{O}1-methyl (1~{S},3~{R})-4-oxidanylidene-1-(phenylmethyl)cyclohexane-1,3-dicarboxylate C20 H26 O5 WAKMFGLCJLDCIS-FOIQADDNSA-N |
Length ( Å ) | Angle ( ˚ ) |
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a = 41.9 | α = 90 |
b = 78.33 | β = 90 |
c = 127.14 | γ = 90 |
Software Name | Purpose |
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PHENIX | refinement |
XSCALE | data scaling |
XDS | data reduction |
PHASER | phasing |
Funding Organization | Location | Grant Number |
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National Research Development and Innovation Office (NKFIH) | Hungary | KKP 126963 |