Download MendeleyUSP28 USP domain apo
Sauer, F., Karal Nair, R., Kisker, C.To be published.
8P19
USP28 USP domain apo
- PDB DOI: https://doi.org/10.2210/pdb8P19/pdb
- Classification: ONCOPROTEIN
- Organism(s): Homo sapiens
- Expression System: Escherichia coli
- Mutation(s): No
- Deposited: 2023-05-11 Released: 2024-05-22
- Funding Organization(s): German Research Foundation (DFG)
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.45 Å
- R-Value Free: 0.222
- R-Value Work: 0.194
- R-Value Observed: 0.195
wwPDB Validation 3D Report Full Report
This is version 1.0 of the entry. See complete history.
Literature
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Ubiquitin carboxyl-terminal hydrolase 28 | 377 | Homo sapiens | Mutation(s): 0 Gene Names: USP28, KIAA1515 EC: 3.4.19.12 |  | |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for Q96RU2 (Homo sapiens) Explore Q96RU2 Go to UniProtKB: Q96RU2 | |||||
PHAROS: Q96RU2 GTEx: ENSG00000048028 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q96RU2 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 2 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| EDO Query on EDO | B [auth A] | 1,2-ETHANEDIOL C2 H6 O2 LYCAIKOWRPUZTN-UHFFFAOYSA-N |  | ||
| CL Query on CL | C [auth A], D [auth A], E [auth A], F [auth A] | CHLORIDE ION Cl VEXZGXHMUGYJMC-UHFFFAOYSA-M |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.45 Å
- R-Value Free: 0.222
- R-Value Work: 0.194
- R-Value Observed: 0.195
- Space Group: H 3 2
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 106.634 | α = 90 |
| b = 106.634 | β = 90 |
| c = 329.857 | γ = 120 |
| Software Name | Purpose |
|---|---|
| PHENIX | refinement |
| Aimless | data scaling |
| XDS | data reduction |
| PHASER | phasing |
Entry History & Funding Information
Deposition Data
- Released Date: 2024-05-22 Deposition Author(s): Sauer, F., Karal Nair, R., Kisker, C.
| Funding Organization | Location | Grant Number |
|---|---|---|
| German Research Foundation (DFG) | Germany | GRK2243 |
| German Research Foundation (DFG) | Germany | KI562/8-2 |
Revision History (Full details and data files)
- Version 1.0: 2024-05-22
Type: Initial release
