8OFX

Molecular Mechanism of trypanosomal AQP2

• PDB DOI: https://doi.org/10.2210/pdb8OFX/pdb
• EM Map EMD-16862: EMDB EMDataResource

• Classification: MEMBRANE PROTEIN
• Organism(s): Trypanosoma brucei brucei
• Expression System: Spodoptera frugiperda
• Mutation(s): No 
• Membrane Protein: Yes  PDBTM


• Deposited: 2023-03-17 Released: 2024-10-02 
• Deposition Author(s): Weyand, S.N., Matusevicius, M., Yamashita, K.
• Funding Organization(s): Wellcome Trust

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Experimental Data Snapshot

• Method: ELECTRON MICROSCOPY
• Resolution: 3.20 Å
• Aggregation State: PARTICLE 
• Reconstruction Method: SINGLE PARTICLE 

Literature

Molecular Mechanism of trypanosomal AQP2

Weyand, S.N.

To be published.

Biological Assembly 1  

Global Symmetry: Cyclic - C4  (Explore in 3D)
Global Stoichiometry: Homo 4-mer - A4 

Biological assembly 1 assigned by authors.

Biological Assembly Evidence: electron microscopy

Macromolecule Content

• Total Structure Weight: 34.01 kDa 
• Atom Count: 1,852 
• Modelled Residue Count: 244 
• Deposited Residue Count: 312 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Aquaglyceroporin 2	A	312	Trypanosoma brucei brucei	Mutation(s): 0  Gene Names: aqp2 Membrane Entity: Yes
UniProt
Find proteins for Q6ZXT3 (Trypanosoma brucei brucei) Explore Q6ZXT3  Go to UniProtKB:  Q6ZXT3

Small Molecules

Ligands 1 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram
VO6 (Subject of Investigation/LOI)	B [auth A]	[(2~{R},4~{S})-2-[4-[[4,6-bis(azanyl)-1,3,5-triazin-2-yl]amino]phenyl]-1,3,2-dithiarsolan-4-yl]methanol C12 H15 As N6 O S2 JCYZMTMYPZHVBF-TVQRCGJNSA-N

Experimental Data & Validation

Experimental Data

• Method: ELECTRON MICROSCOPY
• Resolution: 3.20 Å
• Aggregation State: PARTICLE 
• Reconstruction Method: SINGLE PARTICLE 

Structure Validation

Entry History & Funding Information

Deposition Data

• Released Date: 2024-10-02 
Deposition Author(s): Weyand, S.N., Matusevicius, M., Yamashita, K.

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Funding Organization	Location	Grant Number
Wellcome Trust	United Kingdom	101234/Z/13/Z

Revision History  

• Version 1.0: 2024-10-02
  Type: Initial release