Rational Design of an Artificial Ethylbenzene Hydroxylase Using Molecular Dynamics Simulation to Enhance the Enantioselectivity
Oohora, K., Kagawa, Y., Nishiura, T., Mizohata, E., Schwaneberg, U., Hayashi, T.To be published.
Experimental Data Snapshot
Starting Model: experimental
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Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Myoglobin | 170 | Physeter catodon | Mutation(s): 1  Gene Names: MB EC: 1.11.1 (UniProt), 1.7 (UniProt) | ||
UniProt | |||||
Find proteins for P02185 (Physeter macrocephalus) Explore P02185  Go to UniProtKB:  P02185 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P02185 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 2 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
HNN Query on HNN | C [auth A], H [auth B] | PORPHYCENE CONTAINING MN C34 H36 Mn N4 O4 YIZMGGNKFAWJJG-BWTHIWHLSA-L | |||
SO4 Query on SO4 | D [auth A] E [auth A] F [auth A] G [auth A] I [auth B] | SULFATE ION O4 S QAOWNCQODCNURD-UHFFFAOYSA-L |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 56.953 | α = 90 |
b = 80.699 | β = 90 |
c = 106.82 | γ = 90 |
Software Name | Purpose |
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REFMAC | refinement |
XDS | data reduction |
Coot | model building |
MOLREP | phasing |
Aimless | data scaling |
Funding Organization | Location | Grant Number |
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Japan Society for the Promotion of Science (JSPS) | Japan | -- |