8KB9

Structure of the WDR91 WD40 domain

• PDB DOI: https://doi.org/10.2210/pdb8KB9/pdb

• Classification: ENDOCYTOSIS
• Organism(s): Homo sapiens
• Expression System: Trichoplusia ni
• Mutation(s): No 


• Deposited: 2023-08-04 Released: 2024-08-07 
• Deposition Author(s): Li, J., Ma, X.L., Banerjee, S., Dong, Z.G.
• Funding Organization(s): Not funded

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Experimental Data Snapshot

• Method: X-RAY DIFFRACTION
• Resolution: 1.90 Å
• R-Value Free: 0.238 
• R-Value Work: 0.212 
• R-Value Observed: 0.214 

Starting Model: experimental

Literature

Structure of the WDR91 WD40 domain

Li, J., Ma, X.L., Banerjee, S., Dong, Z.G.

To be published.

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 1 assigned by authors.

Macromolecule Content

• Total Structure Weight: 39.82 kDa 
• Atom Count: 2,614 
• Modelled Residue Count: 333 
• Deposited Residue Count: 363 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
WD repeat-containing protein 91	A	363	Homo sapiens	Mutation(s): 0  Gene Names: WDR91
UniProt & NIH Common Fund Data Resources
Find proteins for A4D1P6 (Homo sapiens) Explore A4D1P6  Go to UniProtKB:  A4D1P6
PHAROS:  A4D1P6 GTEx:  ENSG00000105875

Experimental Data & Validation

Experimental Data

• Method: X-RAY DIFFRACTION
• Resolution: 1.90 Å
• R-Value Free: 0.238 
• R-Value Work: 0.212 
• R-Value Observed: 0.214 
• Space Group: C 2 2 2₁

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 49.721	α = 90
b = 154.353	β = 90
c = 92.314	γ = 90

Software Package:

Software Name	Purpose
PHENIX	refinement
XDS	data reduction
Aimless	data scaling
PHASER	phasing

Structure Validation

Entry History & Funding Information

Deposition Data

• Released Date: 2024-08-07 
Deposition Author(s): Li, J., Ma, X.L., Banerjee, S., Dong, Z.G.

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Funding Organization	Location	Grant Number
Not funded		--

Revision History  

• Version 1.0: 2024-08-07
  Type: Initial release