Cryo-EM structure of human TMEM87A, PE-bound
Han, A., Kim, H.M.To be published.
Experimental Data Snapshot
wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Transmembrane protein 87A,EGFP | 854 | Homo sapiens, Human adenovirus 2 This entity is chimeric | Mutation(s): 1  Gene Names: TMEM87A | ||
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for Q8NBN3 (Homo sapiens) Explore Q8NBN3  Go to UniProtKB:  Q8NBN3 | |||||
PHAROS:  Q8NBN3 GTEx:  ENSG00000103978  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q8NBN3 | ||||
Glycosylation | |||||
Glycosylation Sites: 2 | Go to GlyGen: Q8NBN3-1 | ||||
Sequence AnnotationsExpand | |||||
|
Ligands 2 Unique | |||||
---|---|---|---|---|---|
ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
65I (Subject of Investigation/LOI) Query on 65I | D [auth A] | (9R,12R)-15-amino-12-hydroxy-6,12-dioxo-7,11,13-trioxa-12lambda~5~-phosphapentadecan-9-yl undecanoate C22 H44 N O8 P WTEUZJKVOKXZKR-HXUWFJFHSA-N | |||
NAG (Subject of Investigation/LOI) Query on NAG | B [auth A], C [auth A], E [auth A] | 2-acetamido-2-deoxy-beta-D-glucopyranose C8 H15 N O6 OVRNDRQMDRJTHS-FMDGEEDCSA-N |
Task | Software Package | Version |
---|---|---|
MODEL REFINEMENT | PHENIX | 1.19.2 |
RECONSTRUCTION | cryoSPARC | 4.2.1 |
Funding Organization | Location | Grant Number |
---|---|---|
Other government | Korea, Republic Of | IBS-R030-C1 |