SOD1 and Nanobody1 complex
Shihao, C.To be published.
Experimental Data Snapshot
wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Superoxide dismutase [Cu-Zn] | 153 | Homo sapiens | Mutation(s): 0  Gene Names: SOD1 EC: 1.15.1.1 | ||
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P00441 (Homo sapiens) Explore P00441  Go to UniProtKB:  P00441 | |||||
PHAROS:  P00441 GTEx:  ENSG00000142168  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P00441 | ||||
Sequence AnnotationsExpand | |||||
|
Entity ID: 2 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
NB3 | 127 | Camelus dromedarius | Mutation(s): 0  | ||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
Sequence AnnotationsExpand | |||||
|
Ligands 2 Unique | |||||
---|---|---|---|---|---|
ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
ZN Query on ZN | J [auth A], L [auth C], N [auth E], P [auth G] | ZINC ION Zn PTFCDOFLOPIGGS-UHFFFAOYSA-N | |||
CU Query on CU | I [auth A], K [auth C], M [auth E], O [auth G] | COPPER (II) ION Cu JPVYNHNXODAKFH-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 62.214 | α = 90 |
b = 62.442 | β = 90 |
c = 314.928 | γ = 90 |
Software Name | Purpose |
---|---|
PHENIX | refinement |
HKL-3000 | data scaling |
HKL-3000 | data reduction |
PHENIX | phasing |
Funding Organization | Location | Grant Number |
---|---|---|
Ministry of Science and Technology (MoST, China) | China | 2021YFA0805200 |
National Science Foundation (NSF, China) | China | 32070939 |
National Science Foundation (NSF, China) | China | 82030106 |