ICP1 Csy-dsDNA-Cas1-Cas2/3 complex (fully assembled form) composited structure with C1 symmetry
Zhang, L.X., Feng, Y.To be published.
Experimental Data Snapshot
wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Csy1 | A [auth B], S [auth b] | 177 | Vibrio phage ICP1_2004_A | Mutation(s): 0  Gene Names: TUST1-10_00450 | ![]() |
UniProt | |||||
Find proteins for F1D5V8 (Vibrio phage ICP1_2004_A) Explore F1D5V8  Go to UniProtKB:  F1D5V8 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | F1D5V8 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 2 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Csy2 | B [auth C], T [auth c] | 248 | Vibrio phage ICP1_2004_A | Mutation(s): 0  Gene Names: TUST1-10_00445 | ![]() |
UniProt | |||||
Find proteins for F1D5V7 (Vibrio phage ICP1_2004_A) Explore F1D5V7  Go to UniProtKB:  F1D5V7 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | F1D5V7 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 3 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Cas1 | C [auth D], D [auth E], U [auth d], V [auth e] | 302 | Vibrio phage ICP1_2004_A | Mutation(s): 0  Gene Names: TUST1-10_00460 | ![]() |
UniProt | |||||
Find proteins for F1D5W0 (Vibrio phage ICP1_2004_A) Explore F1D5W0  Go to UniProtKB:  F1D5W0 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | F1D5W0 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 4 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Csy3 | 306 | Vibrio phage ICP1_2004_A | Mutation(s): 0  Gene Names: TUST1-10_00440 | ![]() | |
UniProt | |||||
Find proteins for F1D5V6 (Vibrio phage ICP1_2004_A) Explore F1D5V6  Go to UniProtKB:  F1D5V6 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | F1D5V6 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 5 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Csy4 | F [auth H], X [auth h] | 168 | Vibrio phage ICP1_2004_A | Mutation(s): 0  Gene Names: TUST1-10_00435 | ![]() |
UniProt | |||||
Find proteins for F1D5V5 (Vibrio phage ICP1_2004_A) Explore F1D5V5  Go to UniProtKB:  F1D5V5 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | F1D5V5 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 9 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
HD Cas3-type domain-containing protein | O [auth A], R [auth a] | 930 | Vibrio phage ICP1_2004_A | Mutation(s): 0  Gene Names: TUST1-10_00455 | ![]() |
UniProt | |||||
Find proteins for F1D5V9 (Vibrio phage ICP1_2004_A) Explore F1D5V9  Go to UniProtKB:  F1D5V9 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | F1D5V9 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 6 | |||||
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Molecule | Chains | Length | Organism | Image | |
RNA (60-MER) | DA [auth p], L [auth P] | 60 | Vibrio phage ICP1_2004_A | ![]() | |
Sequence AnnotationsExpand | |||||
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Entity ID: 7 | |||||
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Molecule | Chains | Length | Organism | Image | |
DNA (43-MER) | EA [auth q], M [auth Q], P [auth U] | 43 | Vibrio phage ICP1_2004_A | ![]() | |
Sequence AnnotationsExpand | |||||
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Entity ID: 8 | |||||
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Molecule | Chains | Length | Organism | Image | |
DNA (31-MER) | FA [auth r], N [auth R] | 31 | Vibrio phage ICP1_2004_A | ![]() | |
Sequence AnnotationsExpand | |||||
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Find similar nucleic acids by: Sequence | 3D Structure
Entity ID: 10 | |||||
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Molecule | Chains | Length | Organism | Image | |
DNA (5'-D(*AP*TP*CP*TP*TP*CP*CP*CP*TP*AP*TP*TP*TP*AP*AP*AP*TP*TP*GP*CP*T)-3') | Q [auth V] | 21 | Vibrio phage ICP1_2004_A | ![]() | |
Sequence AnnotationsExpand | |||||
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Ligands 1 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
MN (Subject of Investigation/LOI) Query on MN | GA [auth A], HA [auth A], IA [auth a], JA [auth a] | MANGANESE (II) ION Mn WAEMQWOKJMHJLA-UHFFFAOYSA-N |
Funding Organization | Location | Grant Number |
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National Science Foundation (NSF, China) | China | 32171274 |