8K03 | pdb_00008k03

CryoEM structure of the transketolase ANIP from Streptomyces hygrospinosus

PDB DOI: https://doi.org/10.2210/pdb8K03/pdb
EM Map EMD-36756: EMDB EMDataResource

Classification: TRANSFERASE
Organism(s): Streptomyces hygrospinosus
Expression System: Escherichia coli 'BL21-Gold(DE3)pLysS AG
Mutation(s): No

Deposited: 2023-07-07 Released: 2024-07-17
Deposition Author(s): Jiang, W.X., Ma, L.X., Xing, Q.
Funding Organization(s): National Basic Research Program of China (973 Program)

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.84 Å
Aggregation State: PARTICLE
Reconstruction Method: SINGLE PARTICLE

wwPDB Validation 3D Report Full Report

Validation slider image for 8K03

This is version 1.0 of the entry. See complete history.

Literature

CryoEM structure of the transketolase ANIP from Streptomyces hygrospinosus

Jiang, W.X., Cheng, X.Q., Wu, M., Ma, L.X., Xing, Q.

To be published.

Macromolecule Content

Total Structure Weight: 124.32 kDa
Atom Count: 8,740
Modeled Residue Count: 1,162
Deposited Residue Count: 1,162
Unique protein chains: 1

Macromolecules

Find similar proteins by:

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Putative transketolase	A, B	581	Streptomyces hygrospinosus	Mutation(s): 0 Gene Names: aniP
UniProt
Find proteins for A0A1V0QSW5 (Streptomyces hygrospinosus) Explore A0A1V0QSW5 Go to UniProtKB: A0A1V0QSW5
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	A0A1V0QSW5
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: ELECTRON MICROSCOPY
Resolution: 3.84 Å
Aggregation State: PARTICLE
Reconstruction Method: SINGLE PARTICLE

Structure Validation

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View more in-depth experimental data

Entry History

& Funding Information

Deposition Data

Released Date: 2024-07-17

Deposition Author(s):

Funding Organization	Location	Grant Number
National Basic Research Program of China (973 Program)	China	2021YFC2100100

Revision History (Full details and data files)

Version 1.0: 2024-07-17
Type: Initial release

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.