8JX2

alpha-Hemolysin(G122S/K147R)-SpyTag/SpyCatcher head to head 14-mer

• PDB DOI: https://doi.org/10.2210/pdb8JX2/pdb
• EM Map EMD-36688: EMDB EMDataResource

• Classification: TOXIN
• Organism(s): Staphylococcus aureus
• Expression System: Escherichia coli
• Mutation(s): Yes 


• Deposited: 2023-06-30 Released: 2024-07-03 
• Deposition Author(s): Ishii, Y., Naito, K., Yokoyama, T., Tanaka, Y., Matsuura, T.
• Funding Organization(s): Japan Society for the Promotion of Science (JSPS)

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Experimental Data Snapshot

• Method: ELECTRON MICROSCOPY
• Resolution: 2.20 Å
• Aggregation State: PARTICLE 
• Reconstruction Method: SINGLE PARTICLE 

Literature

alpha-Hemolysin(G122S/K147R)-SpyTag/SpyCatcher head to head 14-mer

Ishii, Y., Naito, K., Yokoyama, T., Tanaka, Y., Matsuura, T.

To be published.

Biological Assembly 1  

Global Symmetry: Dihedral - D7  (Explore in 3D)
Global Stoichiometry: Homo 14-mer - A14 

Biological assembly 1 assigned by authors.

Biological Assembly Evidence: electron microscopy

Macromolecule Content

• Total Structure Weight: 586.65 kDa 
• Atom Count: 32,872 
• Modelled Residue Count: 4,102 
• Deposited Residue Count: 5,215 
• Unique protein chains: 2

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
alpha hemolysin fused with spy-catcher	A, B, C, D, E, F, G	421	Staphylococcus aureus	Mutation(s): 2  Gene Names: hly, hla
UniProt
Find proteins for P09616 (Staphylococcus aureus) Explore P09616  Go to UniProtKB:  P09616

Entity ID: 2
Molecule	Chains	Sequence Length	Organism	Details	Image
alpha hemolysin fused with spy-tag	H, I, J, K, L, M, N	324	Staphylococcus aureus	Mutation(s): 2  Gene Names: hly, hla
UniProt
Find proteins for P09616 (Staphylococcus aureus) Explore P09616  Go to UniProtKB:  P09616

Experimental Data & Validation

Experimental Data

• Method: ELECTRON MICROSCOPY
• Resolution: 2.20 Å
• Aggregation State: PARTICLE 
• Reconstruction Method: SINGLE PARTICLE 

Structure Validation

Entry History & Funding Information

Deposition Data

• Released Date: 2024-07-03 
Deposition Author(s): Ishii, Y., Naito, K., Yokoyama, T., Tanaka, Y., Matsuura, T.

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Funding Organization	Location	Grant Number
Japan Society for the Promotion of Science (JSPS)	Japan	--

Revision History  

• Version 1.0: 2024-07-03
  Type: Initial release