Structure and function of outer membrane protein from Burkholderia pseudomallei (BpsOmp38)
Bunkum, P., Aunkham, A., Bert van den, B., Robinson, R.C., Suginta, W.To be published.
Experimental Data Snapshot
Starting Model: experimental
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Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Outer membrane porin (Fragment) | 360 | Burkholderia pseudomallei | Mutation(s): 0  Gene Names: omp38 Membrane Entity: Yes  | ![]() | |
UniProt | |||||
Find proteins for A0A069BCC8 (Burkholderia pseudomallei) Explore A0A069BCC8  Go to UniProtKB:  A0A069BCC8 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | A0A069BCC8 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 2 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
C8E (Subject of Investigation/LOI) Query on C8E | B [auth A] C [auth A] D [auth A] E [auth A] F [auth A] | (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE C16 H34 O5 FEOZZFHAVXYAMB-UHFFFAOYSA-N | |||
NA (Subject of Investigation/LOI) Query on NA | K [auth A], L [auth A] | SODIUM ION Na FKNQFGJONOIPTF-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 151.045 | α = 90 |
b = 151.045 | β = 90 |
c = 49.099 | γ = 120 |
Software Name | Purpose |
---|---|
PHENIX | refinement |
PDB_EXTRACT | data extraction |
HKL-2000 | data reduction |
PHENIX | phasing |
Funding Organization | Location | Grant Number |
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Vidyasirimedhi Institute of Science and Technology (VISTEC) | Thailand | -- |