8JL1

membrane proteins


Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 2.80 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

wwPDB Validation   3D Report Full Report


This is version 1.0 of the entry. See complete history


Literature

membrane proteins

Yu, J.Ge, J.P.Xu, R.S.

To be published.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Heparan-alpha-glucosaminide N-acetyltransferase
A, B
706Homo sapiensMutation(s): 0 
Gene Names: HGSNATTMEM76
EC: 2.3.1.78
Membrane Entity: Yes 
UniProt & NIH Common Fund Data Resources
Find proteins for Q68CP4 (Homo sapiens)
Explore Q68CP4 
Go to UniProtKB:  Q68CP4
PHAROS:  Q68CP4
GTEx:  ENSG00000165102 
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ68CP4
Glycosylation
Glycosylation Sites: 3Go to GlyGen: Q68CP4-1
Sequence Annotations
Expand
  • Reference Sequence
Oligosaccharides

Help

Entity ID: 2
MoleculeChains Length2D Diagram Glycosylation3D Interactions
2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
C, D, E, F
2N-Glycosylation
Glycosylation Resources
GlyTouCan:  G42666HT
GlyCosmos:  G42666HT
GlyGen:  G42666HT
Small Molecules
Ligands 8 Unique
IDChains Name / Formula / InChI Key2D Diagram3D Interactions
ACO (Subject of Investigation/LOI)
Query on ACO

Download Ideal Coordinates CCD File 
G [auth A],
RA [auth B]
ACETYL COENZYME *A
C23 H38 N7 O17 P3 S
ZSLZBFCDCINBPY-ZSJPKINUSA-N
CLR
Query on CLR

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FB [auth B],
U [auth A]
CHOLESTEROL
C27 H46 O
HVYWMOMLDIMFJA-DPAQBDIFSA-N
R16
Query on R16

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LA [auth A],
WB [auth B]
HEXADECANE
C16 H34
DCAYPVUWAIABOU-UHFFFAOYSA-N
NAG
Query on NAG

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H [auth A],
SA [auth B]
2-acetamido-2-deoxy-beta-D-glucopyranose
C8 H15 N O6
OVRNDRQMDRJTHS-FMDGEEDCSA-N
C14
Query on C14

Download Ideal Coordinates CCD File 
AB [auth B]
BB [auth B]
DB [auth B]
FA [auth A]
GA [auth A]
AB [auth B],
BB [auth B],
DB [auth B],
FA [auth A],
GA [auth A],
HA [auth A],
HB [auth B],
IA [auth A],
IB [auth B],
M [auth A],
N [auth A],
O [auth A],
P [auth A],
Q [auth A],
QB [auth B],
RB [auth B],
S [auth A],
SB [auth B],
TB [auth B],
W [auth A],
X [auth A],
XA [auth B],
YA [auth B],
ZA [auth B]
TETRADECANE
C14 H30
BGHCVCJVXZWKCC-UHFFFAOYSA-N
D12
Query on D12

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AA [auth A]
I [auth A]
LB [auth B]
PA [auth A]
QA [auth B]
AA [auth A],
I [auth A],
LB [auth B],
PA [auth A],
QA [auth B],
TA [auth B]
DODECANE
C12 H26
SNRUBQQJIBEYMU-UHFFFAOYSA-N
D10
Query on D10

Download Ideal Coordinates CCD File 
KB [auth B],
Z [auth A]
DECANE
C10 H22
DIOQZVSQGTUSAI-UHFFFAOYSA-N
OCT
Query on OCT

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BA [auth A]
CA [auth A]
CB [auth B]
DA [auth A]
EA [auth A]
BA [auth A],
CA [auth A],
CB [auth B],
DA [auth A],
EA [auth A],
EB [auth B],
GB [auth B],
J [auth A],
JA [auth A],
JB [auth B],
K [auth A],
KA [auth A],
L [auth A],
MA [auth A],
MB [auth B],
NA [auth A],
NB [auth B],
OA [auth A],
OB [auth B],
PB [auth B],
R [auth A],
T [auth A],
UA [auth B],
UB [auth B],
V [auth A],
VA [auth B],
VB [auth B],
WA [auth B],
XB [auth B],
Y [auth A],
YB [auth B],
ZB [auth B]
N-OCTANE
C8 H18
TVMXDCGIABBOFY-UHFFFAOYSA-N
Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 2.80 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

Structure Validation

View Full Validation Report



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
Chinese Academy of SciencesChina--

Revision History  (Full details and data files)

  • Version 1.0: 2024-05-22
    Type: Initial release