8I2G | pdb_00008i2g

FSHR-Follicle stimulating hormone-compound 716340-Gs complex


Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 2.80 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

wwPDB Validation 3D Report Full Report

Validation slider image for 8I2G

This is version 1.2 of the entry. See complete history

Literature

Mechanism of hormone and allosteric agonist mediated activation of follicle stimulating hormone receptor.

Duan, J.Xu, P.Zhang, H.Luan, X.Yang, J.He, X.Mao, C.Shen, D.D.Ji, Y.Cheng, X.Jiang, H.Jiang, Y.Zhang, S.Zhang, Y.Xu, H.E.

(2023) Nat Commun 14: 519-519

  • DOI: https://doi.org/10.1038/s41467-023-36170-3
  • Primary Citation Related Structures: 
    8I2G, 8I2H

  • PubMed Abstract: 

    Follicle stimulating hormone (FSH) is an essential glycoprotein hormone for human reproduction, which functions are mediated by a G protein-coupled receptor, FSHR. Aberrant FSH-FSHR signaling causes infertility and ovarian hyperstimulation syndrome. Here we report cryo-EM structures of FSHR in both inactive and active states, with the active structure bound to FSH and an allosteric agonist compound 21 f. The structures of FSHR are similar to other glycoprotein hormone receptors, highlighting a conserved activation mechanism of hormone-induced receptor activation. Compound 21 f formed extensive interactions with the TMD to directly activate FSHR. Importantly, the unique residue H615 7.42 in FSHR plays an essential role in determining FSHR selectivity for various allosteric agonists. Together, our structures provide a molecular basis of FSH and small allosteric agonist-mediated FSHR activation, which could inspire the design of FSHR-targeted drugs for the treatment of infertility and controlled ovarian stimulation for in vitro fertilization.


  • Organizational Affiliation
    • State Key Laboratory of Drug Research, Shanghai Institute of Materia Medica, Chinese Academy of Sciences, 201203, Shanghai, China.

Macromolecule Content 

  • Total Structure Weight: 196.97 kDa 
  • Atom Count: 12,694 
  • Modeled Residue Count: 1,540 
  • Deposited Residue Count: 1,682 
  • Unique protein chains: 7

Macromolecules

Find similar proteins by:|  3D Structure
Entity ID: 1
MoleculeChains  Sequence LengthOrganismDetailsImage
chimera of Guanine nucleotide-binding protein G(s) subunit alpha and Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas259Cricetulus griseusHomo sapiens
This entity is chimeric
Mutation(s): 1 
Gene Names: GNASGNAS1
EC: 3.6.5
Membrane Entity: Yes 
UniProt & NIH Common Fund Data Resources
Find proteins for Q5JWF2 (Homo sapiens)
Explore Q5JWF2 
Go to UniProtKB:  Q5JWF2
PHAROS:  Q5JWF2
GTEx:  ENSG00000087460 
Find proteins for Q8R4A8 (Cricetulus griseus)
Explore Q8R4A8 
Go to UniProtKB:  Q8R4A8
Entity Groups
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupsQ8R4A8Q5JWF2
Sequence Annotations
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Reference Sequence
Find similar proteins by:|  3D Structure
Entity ID: 2
MoleculeChains  Sequence LengthOrganismDetailsImage
Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1345Homo sapiensMutation(s): 0 
Gene Names: GNB1
UniProt & NIH Common Fund Data Resources
Find proteins for P62873 (Homo sapiens)
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Go to UniProtKB:  P62873
PHAROS:  P62873
GTEx:  ENSG00000078369 
Entity Groups
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UniProt GroupP62873
Sequence Annotations
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Reference Sequence
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Entity ID: 3
MoleculeChains  Sequence LengthOrganismDetailsImage
Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2C [auth G]71Homo sapiensMutation(s): 0 
Gene Names: GNG2
Membrane Entity: Yes 
UniProt & NIH Common Fund Data Resources
Find proteins for P59768 (Homo sapiens)
Explore P59768 
Go to UniProtKB:  P59768
PHAROS:  P59768
GTEx:  ENSG00000186469 
Entity Groups
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP59768
Sequence Annotations
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Reference Sequence
Find similar proteins by:|  3D Structure
Entity ID: 4
MoleculeChains  Sequence LengthOrganismDetailsImage
Nb35D [auth N]128Lama glamaMutation(s): 0 
Find similar proteins by:|  3D Structure
Entity ID: 5
MoleculeChains  Sequence LengthOrganismDetailsImage
Follicle-stimulating hormone receptorE [auth R]678Homo sapiensMutation(s): 1 
Gene Names: FSHR
Membrane Entity: Yes 
UniProt & NIH Common Fund Data Resources
Find proteins for P23945 (Homo sapiens)
Explore P23945 
Go to UniProtKB:  P23945
PHAROS:  P23945
GTEx:  ENSG00000170820 
Entity Groups
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP23945
Glycosylation
Glycosylation Sites: 1Go to GlyGen: P23945-1
Sequence Annotations
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Reference Sequence
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Entity ID: 6
MoleculeChains  Sequence LengthOrganismDetailsImage
Glycoprotein hormones alpha chainF [auth X]92Homo sapiensMutation(s): 1 
Gene Names: CGA
Membrane Entity: Yes 
UniProt & NIH Common Fund Data Resources
Find proteins for P01215 (Homo sapiens)
Explore P01215 
Go to UniProtKB:  P01215
PHAROS:  P01215
GTEx:  ENSG00000135346 
Entity Groups
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP01215
Glycosylation
Glycosylation Sites: 1Go to GlyGen: P01215-1
Sequence Annotations
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Reference Sequence
Find similar proteins by:|  3D Structure
Entity ID: 7
MoleculeChains  Sequence LengthOrganismDetailsImage
Follitropin subunit betaG [auth Y]109Homo sapiensMutation(s): 0 
Gene Names: FSHB
Membrane Entity: Yes 
UniProt & NIH Common Fund Data Resources
Find proteins for P01225 (Homo sapiens)
Explore P01225 
Go to UniProtKB:  P01225
PHAROS:  P01225
GTEx:  ENSG00000131808 
Entity Groups
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP01225
Glycosylation
Glycosylation Sites: 1Go to GlyGen: P01225-1
Sequence Annotations
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Reference Sequence

Oligosaccharides

Help  
Entity ID: 8
MoleculeChains Length2D Diagram GlycosylationD Interactions
2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranoseH [auth C]2N-Glycosylation
Glycosylation Resources
GlyTouCan: G42666HT
GlyCosmos: G42666HT
GlyGen: G42666HT

Small Molecules

Ligands 5 Unique
IDChains Name / Formula / InChI Key2D Diagram3D Interactions
O6F
(Subject of Investigation/LOI)

Query on O6F



Download:Ideal Coordinates CCD File
BA [auth R]N-tert-butyl-N-ethyl-8-methoxy-9-propan-2-yloxy-1-thiophen-2-yl-5,6-dihydroimidazo[5,1-a]isoquinoline-3-carboxamide
C26 H33 N3 O3 S
DNSWBPOFBBWYJX-UHFFFAOYSA-N
CLR

Query on CLR



Download:Ideal Coordinates CCD File
AA [auth R]
I [auth R]
J [auth R]
K [auth R]
L [auth R]
AA [auth R],
I [auth R],
J [auth R],
K [auth R],
L [auth R],
M [auth R],
S [auth R],
U [auth R],
V [auth R],
W [auth R],
X [auth R],
Y [auth R],
Z [auth R]
CHOLESTEROL
C27 H46 O
HVYWMOMLDIMFJA-DPAQBDIFSA-N
PLM

Query on PLM



Download:Ideal Coordinates CCD File
N [auth R],
O [auth R],
P [auth R]
PALMITIC ACID
C16 H32 O2
IPCSVZSSVZVIGE-UHFFFAOYSA-N
MYR

Query on MYR



Download:Ideal Coordinates CCD File
Q [auth R],
R
MYRISTIC ACID
C14 H28 O2
TUNFSRHWOTWDNC-UHFFFAOYSA-N
NAG

Query on NAG



Download:Ideal Coordinates CCD File
CA [auth X],
DA [auth Y],
EA [auth Y],
T [auth R]
2-acetamido-2-deoxy-beta-D-glucopyranose
C8 H15 N O6
OVRNDRQMDRJTHS-FMDGEEDCSA-N

Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 2.80 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

Structure Validation

View Full Validation Report



Entry History 

& Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
National Natural Science Foundation of China (NSFC)China32130022

Revision History  (Full details and data files)

  • Version 1.0: 2023-03-29
    Type: Initial release
  • Version 1.1: 2023-04-05
    Changes: Source and taxonomy, Structure summary
  • Version 1.2: 2024-11-20
    Changes: Data collection, Structure summary