Structure of CDK9/cyclin T1 in complex with inhibitor
Jiang, C., Ye, Y., Huang, Y.To be published.
Experimental Data Snapshot
Starting Model: experimental
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Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Cyclin-dependent kinase 9 | 332 | Homo sapiens | Mutation(s): 0  Gene Names: CDK9, CDC2L4, TAK EC: 2.7.11.22 (PDB Primary Data), 2.7.11.23 (PDB Primary Data) | ||
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P50750 (Homo sapiens) Explore P50750  Go to UniProtKB:  P50750 | |||||
PHAROS:  P50750 GTEx:  ENSG00000136807  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P50750 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 2 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Cyclin-T1 | 259 | Homo sapiens | Mutation(s): 0  Gene Names: CCNT1 | ||
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for O60563 (Homo sapiens) Explore O60563  Go to UniProtKB:  O60563 | |||||
PHAROS:  O60563 GTEx:  ENSG00000129315  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | O60563 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 1 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
NJ6 (Subject of Investigation/LOI) Query on NJ6 | C [auth A] | 2-[(4-azanylcyclohexyl)amino]-7-cyclopentyl-~{N},~{N}-dimethyl-pyrrolo[2,3-d]pyrimidine-6-carboxamide C20 H30 N6 O HZJPJDOVXYTUTI-SHTZXODSSA-N |
Modified Residues 1 Unique | |||||
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ID | Chains | Type | Formula | 2D Diagram | Parent |
TPO Query on TPO | A | L-PEPTIDE LINKING | C4 H10 N O6 P | THR |
Length ( Å ) | Angle ( ˚ ) |
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a = 172.15 | α = 90 |
b = 172.15 | β = 90 |
c = 97.292 | γ = 120 |
Software Name | Purpose |
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PHENIX | refinement |
SCALA | data scaling |
XDS | data reduction |
PHENIX | phasing |
Funding Organization | Location | Grant Number |
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Not funded | -- |