8HOV

Crystal structure of Hms1p from Saccharomyces cerevisiae


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.77 Å
  • R-Value Free: 0.274 
  • R-Value Work: 0.234 
  • R-Value Observed: 0.235 

Starting Model: other
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wwPDB Validation   3D Report Full Report


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Literature

Crystal structure of Hms1p from Saccharomyces cerevisiae

Khan, M.H.

To be published.

Macromolecules

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Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Transcription factor HMS1
A, B, C, D, E
A, B, C, D, E, F
108Saccharomyces cerevisiaeMutation(s): 0 
Gene Names: HMS1YOR032COR26.22
UniProt
Find proteins for Q12398 (Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Explore Q12398 
Go to UniProtKB:  Q12398
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ12398
Sequence Annotations
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  • Reference Sequence

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Entity ID: 2
MoleculeChains LengthOrganismImage
DNA (5'-D(*TP*CP*AP*CP*GP*CP*AP*T)-3')
G, H, K
8Saccharomyces cerevisiae
Sequence Annotations
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  • Reference Sequence

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Entity ID: 3
MoleculeChains LengthOrganismImage
DNA (5'-D(*AP*TP*GP*CP*GP*TP*GP*A)-3')
I, J, L
8Saccharomyces cerevisiae
Sequence Annotations
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  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.77 Å
  • R-Value Free: 0.274 
  • R-Value Work: 0.234 
  • R-Value Observed: 0.235 
  • Space Group: P 1 21 1
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 78.416α = 90
b = 99.175β = 109.25
c = 79.998γ = 90
Software Package:
Software NamePurpose
PHENIXrefinement
PHENIXmodel building
HKL-2000data reduction
Cootmodel building
PHASERphasing
HKL-2000data scaling

Structure Validation

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Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
National Science Foundation (NSF, China)China--

Revision History  (Full details and data files)

  • Version 1.0: 2024-06-12
    Type: Initial release