8HCQ

Cryo-EM structure of endothelin1-bound ETAR-Gq complex


Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.01 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

wwPDB Validation   3D Report Full Report


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Literature

Structural basis of peptide recognition and activation of endothelin receptors.

Ji, Y.Duan, J.Yuan, Q.He, X.Yang, G.Zhu, S.Wu, K.Hu, W.Gao, T.Cheng, X.Jiang, H.Eric Xu, H.Jiang, Y.

(2023) Nat Commun 14: 1268-1268

  • DOI: https://doi.org/10.1038/s41467-023-36998-9
  • Primary Citation of Related Structures:  
    8HBD, 8HCQ, 8HCX

  • PubMed Abstract: 

    Endothelin system comprises three endogenous 21-amino-acid peptide ligands endothelin-1, -2, and -3 (ET-1/2/3), and two G protein-coupled receptor (GPCR) subtypes-endothelin receptor A (ET A R) and B (ET B R). Since ET-1, the first endothelin, was identified in 1988 as one of the most potent endothelial cell-derived vasoconstrictor peptides with long-lasting actions, the endothelin system has attracted extensive attention due to its critical role in vasoregulation and close relevance in cardiovascular-related diseases. Here we present three cryo-electron microscopy structures of ET A R and ET B R bound to ET-1 and ET B R bound to the selective peptide IRL1620. These structures reveal a highly conserved recognition mode of ET-1 and characterize the ligand selectivity by ETRs. They also present several conformation features of the active ETRs, thus revealing a specific activation mechanism. Together, these findings deepen our understanding of endothelin system regulation and offer an opportunity to design selective drugs targeting specific ETR subtypes.


  • Organizational Affiliation

    State Key Laboratory of Drug Research, Shanghai Institute of Materia Medica, Chinese Academy of Sciences, Shanghai, 201203, China.


Macromolecules
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Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Guanine nucleotide-binding protein G(q) subunit alpha-1246Homo sapiensMutation(s): 0 
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Entity ID: 2
MoleculeChains Sequence LengthOrganismDetailsImage
Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1377Homo sapiensMutation(s): 0 
Gene Names: GNB1
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Find proteins for P62873 (Homo sapiens)
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PHAROS:  P62873
GTEx:  ENSG00000078369 
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Entity ID: 3
MoleculeChains Sequence LengthOrganismDetailsImage
scFv16C [auth E]285Mus musculusMutation(s): 0 
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Entity ID: 4
MoleculeChains Sequence LengthOrganismDetailsImage
Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2D [auth G]71Homo sapiensMutation(s): 0 
Gene Names: GNG2
Membrane Entity: Yes 
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GTEx:  ENSG00000186469 
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Entity ID: 5
MoleculeChains Sequence LengthOrganismDetailsImage
Endothelin-1E [auth L]21Homo sapiensMutation(s): 0 
Gene Names: EDN1
Membrane Entity: Yes 
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GTEx:  ENSG00000078401 
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Entity ID: 6
MoleculeChains Sequence LengthOrganismDetailsImage
Endothelin-1 receptor,Oplophorus-luciferin 2-monooxygenase catalytic subunit chimeraF [auth R]622Homo sapiensMutation(s): 0 
Gene Names: EDNRAETAETRA
EC: 1.13.12.13
Membrane Entity: Yes 
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GTEx:  ENSG00000151617 
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Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.01 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

Structure Validation

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Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
National Natural Science Foundation of China (NSFC)China--

Revision History  (Full details and data files)

  • Version 1.0: 2023-03-22
    Type: Initial release
  • Version 1.1: 2023-10-04
    Changes: Data collection, Database references