Crystal Structure of Nanobody VHH114 Bound to Its Antigen PA14 Cif
Simard, A.R., Madden, D.R.To be published.
Experimental Data Snapshot
Starting Models: experimental
View more details
wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
CFTR inhibitory factor | A [auth C] | 295 | Pseudomonas aeruginosa PA14 | Mutation(s): 0  Gene Names: PA14_26090 | ![]() |
UniProt | |||||
Find proteins for A0A0H2ZD27 (Pseudomonas aeruginosa (strain UCBPP-PA14)) Explore A0A0H2ZD27  Go to UniProtKB:  A0A0H2ZD27 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | A0A0H2ZD27 | ||||
Sequence AnnotationsExpand | |||||
|
Entity ID: 2 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Nanobody VHH114 | B [auth A] | 126 | Vicugna pacos | Mutation(s): 0  | ![]() |
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
Sequence AnnotationsExpand | |||||
|
Ligands 1 Unique | |||||
---|---|---|---|---|---|
ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
FLC Query on FLC | C, D [auth C] | CITRATE ANION C6 H5 O7 KRKNYBCHXYNGOX-UHFFFAOYSA-K |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 163.487 | α = 90 |
b = 163.487 | β = 90 |
c = 74.959 | γ = 120 |
Software Name | Purpose |
---|---|
XDS | data reduction |
XSCALE | data scaling |
PHASER | phasing |
Coot | model building |
PHENIX | refinement |
Funding Organization | Location | Grant Number |
---|---|---|
National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID) | United States | R01-AI091699 |
National Institutes of Health/National Institute of Diabetes and Digestive and Kidney Disease (NIH/NIDDK) | United States | P30-DK117469 |
National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS) | United States | P20-GM113132 |
National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID) | United States | T32AI007519 |
Cystic Fibrosis Foundation | United States | STANTO19R0 |