EGFR(T790M/V948R) kinase in complex with benzimidazole allosteric inhibitor
Beyett, T.S., Eck, M.J.To be published.
Experimental Data Snapshot
Starting Model: experimental
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Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Epidermal growth factor receptor | 331 | Homo sapiens | Mutation(s): 2  Gene Names: EGFR, ERBB, ERBB1, HER1 EC: 2.7.10.1 | ||
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P00533 (Homo sapiens) Explore P00533  Go to UniProtKB:  P00533 | |||||
PHAROS:  P00533 GTEx:  ENSG00000146648  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P00533 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 3 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
YW5 (Subject of Investigation/LOI) Query on YW5 | G [auth A], J [auth B], M [auth C], P [auth D] | 2-[(R)-(1H-benzimidazol-2-yl)(3-fluorophenyl)methyl]-6-[4-(1-methylpiperidin-4-yl)phenyl]-2,3-dihydro-1H-isoindol-1-one C34 H31 F N4 O ZMKPSKAUYOLPIA-JGCGQSQUSA-N | |||
ANP Query on ANP | F [auth A], I [auth B], L [auth C], O [auth D] | PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER C10 H17 N6 O12 P3 PVKSNHVPLWYQGJ-KQYNXXCUSA-N | |||
MG Query on MG | E [auth A], H [auth B], K [auth C], N [auth D] | MAGNESIUM ION Mg JLVVSXFLKOJNIY-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
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a = 169.45 | α = 90 |
b = 73.45 | β = 118.45 |
c = 118.419 | γ = 90 |
Software Name | Purpose |
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DIALS | data scaling |
PHENIX | refinement |
DIALS | data reduction |
PHASER | phasing |
Coot | model building |
Funding Organization | Location | Grant Number |
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National Institutes of Health/National Cancer Institute (NIH/NCI) | United States | 5R01CA116020-16 |
National Institutes of Health/National Cancer Institute (NIH/NCI) | United States | 5R01CA201049-08 |