8FW1

Gluconobacter Ene-Reductase (GluER) mutant - PagER


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.50 Å
  • R-Value Free: 0.273 
  • R-Value Work: 0.268 
  • R-Value Observed: 0.279 

Starting Model: experimental
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Ligand Structure Quality Assessment 


This is version 1.1 of the entry. See complete history


Literature

Regioselective Radical Alkylation of Arenes Using Evolved Photoenzymes.

Page, C.G.Cao, J.Oblinsky, D.G.MacMillan, S.N.Dahagam, S.Lloyd, R.M.Charnock, S.J.Scholes, G.D.Hyster, T.K.

(2023) J Am Chem Soc 145: 11866-11874

  • DOI: https://doi.org/10.1021/jacs.3c03607
  • Primary Citation of Related Structures:  
    8FW1

  • PubMed Abstract: 

    Substituted arenes are ubiquitous in molecules with medicinal functions, making their synthesis a critical consideration when designing synthetic routes. Regioselective C-H functionalization reactions are attractive for preparing alkylated arenes; however, the selectivity of existing methods is modest and primarily governed by the substrate's electronic properties. Here, we demonstrate a biocatalyst-controlled method for the regioselective alkylation of electron-rich and electron-deficient heteroarenes. Starting from an unselective "ene"-reductase (ERED) (GluER-T36A), we evolved a variant that selectively alkylates the C4 position of indole, an elusive position using prior technologies. Mechanistic studies across the evolutionary series indicate that changes to the protein active site alter the electronic character of the charge transfer (CT) complex responsible for radical formation. This resulted in a variant with a significant degree of ground-state CT in the CT complex. Mechanistic studies on a C2-selective ERED suggest that the evolution of GluER-T36A helps disfavor a competing mechanistic pathway. Additional protein engineering campaigns were carried out for a C8-selective quinoline alkylation. This study highlights the opportunity to use enzymes for regioselective radical reactions, where small molecule catalysts struggle to alter selectivity.


  • Organizational Affiliation

    Department of Chemistry and Chemical Biology, Cornell University, Ithaca, New York 14850, United States.


Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
N-ethylmaleimide reductase
A, B, C
362Gluconobacter oxydansMutation(s): 0 
Gene Names: nox
UniProt
Find proteins for Q5FTL6 (Gluconobacter oxydans (strain 621H))
Explore Q5FTL6 
Go to UniProtKB:  Q5FTL6
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ5FTL6
Sequence Annotations
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  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.50 Å
  • R-Value Free: 0.273 
  • R-Value Work: 0.268 
  • R-Value Observed: 0.279 
  • Space Group: P 1
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 50.165α = 90.51
b = 51.849β = 90.11
c = 144.935γ = 114.86
Software Package:
Software NamePurpose
DIALSdata reduction
PHENIXrefinement
PHASERphasing

Structure Validation

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Ligand Structure Quality Assessment 


Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)United StatesGM127703-06
National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)United StatesGM141256

Revision History  (Full details and data files)

  • Version 1.0: 2023-06-28
    Type: Initial release
  • Version 1.1: 2023-10-25
    Changes: Data collection, Refinement description