8FHA

Intramolecular ester bond-containing repeat domain 1 from Suipraoptans intestinalis adhesin

PDB DOI: https://doi.org/10.2210/pdb8FHA/pdb

Classification: CELL ADHESION
Organism(s): Suipraeoptans intestinalis
Expression System: Escherichia coli
Mutation(s): No

Deposited: 2022-12-13 Released: 2024-06-19
Deposition Author(s): Jin, S., Young, P.G., Squire, C.J.
Funding Organization(s): Not funded

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 1.49 Å
R-Value Free: 0.212
R-Value Work: 0.166

Starting Model: in silico
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wwPDB Validation 3D Report Full Report

This is version 1.0 of the entry. See complete history.

Literature

Intramolecular ester bond-containing repeat domain from Suipraoptans intestinalis adhesin

Jin, S., Young, P.G., Squire, C.J.

To be published.

Macromolecule Content

Total Structure Weight: 64.53 kDa
Atom Count: 4,457
Modelled Residue Count: 571
Deposited Residue Count: 608
Unique protein chains: 1

Macromolecules

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(by identity cutoff) | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Adhesin	A, B, C, D	152	Suipraeoptans intestinalis	Mutation(s): 0 Gene Names: FYJ34_05395
UniProt
Find proteins for A0A6N7UZI9 (Suipraeoptans intestinalis) Explore A0A6N7UZI9 Go to UniProtKB: A0A6N7UZI9
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	A0A6N7UZI9
Sequence Annotations Expand
Reference Sequence

Small Molecules

Ligands 2 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram	3D Interactions
CA (Subject of Investigation/LOI) Query on CA Download Ideal Coordinates CCD File SDF format, chain E [auth A] SDF format, chain G [auth B] SDF format, chain K [auth C] SDF format, chain M [auth D] MOL2 format, chain E [auth A] MOL2 format, chain G [auth B] MOL2 format, chain K [auth C] MOL2 format, chain M [auth D] mmCIF format, chain E [auth A] mmCIF format, chain G [auth B] mmCIF format, chain K [auth C] mmCIF format, chain M [auth D]	E [auth A], G [auth B], K [auth C], M [auth D]	CALCIUM ION Ca BHPQYMZQTOCNFJ-UHFFFAOYSA-N		Interactions Focus chain E [auth A] Focus chain G [auth B] Focus chain K [auth C] Focus chain M [auth D] Interactions & Density Focus chain E [auth A] Focus chain G [auth B] Focus chain K [auth C] Focus chain M [auth D]
NA (Subject of Investigation/LOI) Query on NA Download Ideal Coordinates CCD File SDF format, chain F [auth A] SDF format, chain H [auth B] SDF format, chain I [auth B] SDF format, chain J [auth C] SDF format, chain L [auth C] SDF format, chain N [auth D] MOL2 format, chain F [auth A] MOL2 format, chain H [auth B] MOL2 format, chain I [auth B] MOL2 format, chain J [auth C] MOL2 format, chain L [auth C] MOL2 format, chain N [auth D] mmCIF format, chain F [auth A] mmCIF format, chain H [auth B] mmCIF format, chain I [auth B] mmCIF format, chain J [auth C] mmCIF format, chain L [auth C] mmCIF format, chain N [auth D]	F [auth A] H [auth B] I [auth B] J [auth C] L [auth C] F [auth A], H [auth B], I [auth B], J [auth C], L [auth C], N [auth D]	SODIUM ION Na FKNQFGJONOIPTF-UHFFFAOYSA-N		Interactions Focus chain F [auth A] Focus chain H [auth B] Focus chain I [auth B] Focus chain J [auth C] Focus chain L [auth C] Focus chain N [auth D] Interactions & Density Focus chain F [auth A] Focus chain H [auth B] Focus chain I [auth B] Focus chain J [auth C] Focus chain L [auth C] Focus chain N [auth D]