8E4G | pdb_00008e4g

Remodeling of the bacteriophage T7 during initial infection

  • Classification: VIRUS
  • Organism(s): Escherichia phage T7
  • Mutation(s): No 

  • Deposited: 2022-08-18 Released: 2023-09-27 
  • Deposition Author(s): Wang, C., Liu, J., Molineux, I.J.
  • Funding Organization(s): National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)

Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.20 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

wwPDB Validation 3D Report Full Report

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This is version 1.1 of the entry. See complete history. 

Literature

Virion remodeling of bacteriophage T7 during infection initiation

Wang, C., Park, T., Liu, J., Molineux, I.J.

To be published.

Macromolecule Content 

  • Total Structure Weight: 320.5 kDa 
  • Atom Count: 22,167 
  • Modeled Residue Count: 2,809 
  • Deposited Residue Count: 2,855 
  • Unique protein chains: 6

Macromolecules

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|  3D Structure
Entity ID: 1
MoleculeChains  Sequence LengthOrganismDetailsImage
Portal proteinA [auth r],
J [auth u]		496Escherichia phage T7Mutation(s): 0 
UniProt
Find proteins for P03728 (Escherichia phage T7)
Explore P03728 
Go to UniProtKB:  P03728
Entity Groups
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UniProt GroupP03728
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Reference Sequence
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|  3D Structure
Entity ID: 2
MoleculeChains  Sequence LengthOrganismDetailsImage
Tail tubular protein gp11B [auth 0],
C [auth 5]		196Escherichia phage T7Mutation(s): 0 
UniProt
Find proteins for P03746 (Escherichia phage T7)
Explore P03746 
Go to UniProtKB:  P03746
Entity Groups
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UniProt GroupP03746
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Reference Sequence
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|  3D Structure
Entity ID: 3
MoleculeChains  Sequence LengthOrganismDetailsImage
Tail fiber proteinD [auth O],
F [auth Y],
I [auth g]		165Escherichia phage T7Mutation(s): 0 
UniProt
Find proteins for P03748 (Escherichia phage T7)
Explore P03748 
Go to UniProtKB:  P03748
Entity Groups
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UniProt GroupP03748
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Reference Sequence
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|  3D Structure
Entity ID: 4
MoleculeChains  Sequence LengthOrganismDetailsImage
Tail tubular protein gp12E [auth P]794Escherichia phage T7Mutation(s): 0 
UniProt
Find proteins for P03747 (Escherichia phage T7)
Explore P03747 
Go to UniProtKB:  P03747
Entity Groups
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UniProt GroupP03747
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Reference Sequence
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|  3D Structure
Entity ID: 5
MoleculeChains  Sequence LengthOrganismDetailsImage
Internal virion protein gp14G [auth a]127Escherichia phage T7Mutation(s): 0 
UniProt
Find proteins for P03724 (Escherichia phage T7)
Explore P03724 
Go to UniProtKB:  P03724
Entity Groups
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UniProt GroupP03724
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Reference Sequence
Find similar proteins by:
|  3D Structure
Entity ID: 6
MoleculeChains  Sequence LengthOrganismDetailsImage
Internal virion protein gp15H [auth x]55Escherichia phage T7Mutation(s): 0 
UniProt
Find proteins for P03725 (Escherichia phage T7)
Explore P03725 
Go to UniProtKB:  P03725
Entity Groups
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UniProt GroupP03725
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Reference Sequence

Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.20 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 
EM Software:
TaskSoftware PackageVersion
MODEL REFINEMENTPHENIX

Structure Validation

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Entry History 

& Funding Information

Deposition Data

Funding OrganizationLocationGrant Number
National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)United States--

Revision History  (Full details and data files)

  • Version 1.0: 2023-09-27
    Type: Initial release
  • Version 1.1: 2025-05-28
    Changes: Data collection, Structure summary