Crystal structure of Scribble PDZ1 with human papillomavirus strain 16 E6 peptide
Stewart, B.Z., Caria, S., Humbert, P.O., Kvansakul, M.To be published.
Experimental Data Snapshot
wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Protein scribble homolog | 96 | Homo sapiens | Mutation(s): 0  Gene Names: SCRIB, CRIB1, KIAA0147, LAP4, SCRB1, VARTUL | ||
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for Q14160 (Homo sapiens) Explore Q14160  Go to UniProtKB:  Q14160 | |||||
PHAROS:  Q14160 GTEx:  ENSG00000180900  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q14160 | ||||
Sequence AnnotationsExpand | |||||
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Find similar proteins by: Sequence | 3D Structure
Entity ID: 2 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Protein E6 | 10 | Human papillomavirus 16 | Mutation(s): 0  | ||
UniProt | |||||
Find proteins for P03126 (Human papillomavirus type 16) Explore P03126  Go to UniProtKB:  P03126 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P03126 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 3 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
EPE Query on EPE | D [auth A], E [auth A], F [auth A], G [auth A] | 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID C8 H18 N2 O4 S JKMHFZQWWAIEOD-UHFFFAOYSA-N | |||
IPA Query on IPA | H [auth A] | ISOPROPYL ALCOHOL C3 H8 O KFZMGEQAYNKOFK-UHFFFAOYSA-N | |||
NA Query on NA | C [auth A] | SODIUM ION Na FKNQFGJONOIPTF-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
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a = 70.611 | α = 90 |
b = 70.611 | β = 90 |
c = 140.782 | γ = 120 |
Software Name | Purpose |
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PHENIX | refinement |
DIALS | data reduction |
Aimless | data scaling |
PHASER | phasing |
Funding Organization | Location | Grant Number |
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National Health and Medical Research Council (NHMRC, Australia) | Australia | APP1103871 |
Australian Research Council (ARC) | Australia | FT130101349 |