Crystal structure of Scribble PDZ1 with human papillomavirus strain 16 E6 peptide
Stewart, B.Z., Caria, S., Humbert, P.O., Kvansakul, M.To be published.
Experimental Data Snapshot
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Protein scribble homolog | 120 | Homo sapiens | Mutation(s): 0  Gene Names: SCRIB, CRIB1, KIAA0147, LAP4, SCRB1, VARTUL | ||
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for Q14160 (Homo sapiens) Explore Q14160  Go to UniProtKB:  Q14160 | |||||
PHAROS:  Q14160 GTEx:  ENSG00000180900  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q14160 | ||||
Sequence AnnotationsExpand | |||||
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Find similar proteins by: Sequence | 3D Structure
Entity ID: 2 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Protein E6 | 10 | Human papillomavirus 16 | Mutation(s): 0  | ||
UniProt | |||||
Find proteins for P03126 (Human papillomavirus type 16) Explore P03126  Go to UniProtKB:  P03126 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P03126 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 3 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
SDY Query on SDY | E [auth A] | beta-D-talopyranose C6 H12 O6 WQZGKKKJIJFFOK-QBFJYBIGSA-N | |||
PEG Query on PEG | F [auth A] G [auth A] H [auth A] I [auth A] J [auth A] | DI(HYDROXYETHYL)ETHER C4 H10 O3 MTHSVFCYNBDYFN-UHFFFAOYSA-N | |||
NH4 Query on NH4 | O [auth C] | AMMONIUM ION H4 N QGZKDVFQNNGYKY-UHFFFAOYSA-O |
Length ( Å ) | Angle ( ˚ ) |
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a = 74.62 | α = 90 |
b = 31.14 | β = 107.56 |
c = 91.76 | γ = 90 |
Software Name | Purpose |
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PHENIX | refinement |
DIALS | data reduction |
Aimless | data scaling |
PHASER | phasing |
Funding Organization | Location | Grant Number |
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National Health and Medical Research Council (NHMRC, Australia) | Australia | APP1103871 |
Australian Research Council (ARC) | Australia | FT130101349 |