8A61

S. cerevisiae apo phosphorylated APC/C

Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 5.40 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

wwPDB Validation   3D Report Full Report


This is version 1.1 of the entry. See complete history. 


Literature

Cryo-EM structure of the S. cerevisiae apo phosphorylated APC/C

Barford, D., Fernandez-Vazquez, E., Zhang, Z., Yang, J.

To be published.

Macromolecules
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Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Anaphase-promoting complex subunit CDC27A [auth F],
F [auth H]		758Saccharomyces cerevisiaeMutation(s): 0 
Gene Names: CDC27, APC3, SNB1, YBL084C, YBL0718
UniProt
Find proteins for P38042 (Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
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Entity ID: 2
MoleculeChains Sequence LengthOrganismDetailsImage
Anaphase-promoting complex subunit CDC16B [auth J],
C [auth K]		850Saccharomyces cerevisiaeMutation(s): 0 
Gene Names: CDC16, YKL022C
UniProt
Find proteins for P09798 (Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
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Entity ID: 3
MoleculeChains Sequence LengthOrganismDetailsImage
Anaphase-promoting complex subunit CDC26D [auth G],
E [auth W]		124Saccharomyces cerevisiaeMutation(s): 0 
Gene Names: CDC26, HIT3, SCD26, YFR036W
UniProt
Find proteins for P14724 (Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
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Entity ID: 4
MoleculeChains Sequence LengthOrganismDetailsImage
Anaphase-promoting complex subunit 9G [auth E]265Saccharomyces cerevisiaeMutation(s): 0 
Gene Names: APC9, YLR102C
UniProt
Find proteins for Q12107 (Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
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Entity ID: 5
MoleculeChains Sequence LengthOrganismDetailsImage
Anaphase-promoting complex subunit 2H [auth T]853Saccharomyces cerevisiaeMutation(s): 0 
Gene Names: APC2, RSI1, YLR127C, L3105, L3108
UniProt
Find proteins for Q12440 (Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
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Entity ID: 6
MoleculeChains Sequence LengthOrganismDetailsImage
Anaphase-promoting complex subunit 11I [auth U]165Saccharomyces cerevisiaeMutation(s): 0 
Gene Names: APC11, YDL008W, D2900
EC: 6.3.2
UniProt
Find proteins for Q12157 (Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
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Entity ID: 7
MoleculeChains Sequence LengthOrganismDetailsImage
Anaphase-promoting complex subunit 1J [auth C]1,748Saccharomyces cerevisiaeMutation(s): 0 
Gene Names: APC1, YNL172W, N1677
UniProt
Find proteins for P53886 (Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
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Entity ID: 8
MoleculeChains Sequence LengthOrganismDetailsImage
Anaphase-promoting complex subunit 5K [auth O]685Saccharomyces cerevisiaeMutation(s): 0 
Gene Names: APC5, RMC1, YOR249C
UniProt
Find proteins for Q08683 (Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
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Entity ID: 9
MoleculeChains Sequence LengthOrganismDetailsImage
Anaphase-promoting complex subunit CDC23L [auth D],
M [auth P]		626Saccharomyces cerevisiaeMutation(s): 0 
Gene Names: CDC23, YHR166C
UniProt
Find proteins for P16522 (Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
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Entity ID: 10
MoleculeChains Sequence LengthOrganismDetailsImage
Anaphase-promoting complex subunit SWM1N [auth I]170Saccharomyces cerevisiaeMutation(s): 0 
Gene Names: SWM1, APC13, YDR260C, YD9320A.11, YD9320A.11c
UniProt
Find proteins for Q12379 (Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
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Entity ID: 11
MoleculeChains Sequence LengthOrganismDetailsImage
Anaphase-promoting complex subunit MND2O [auth N]368Saccharomyces cerevisiaeMutation(s): 0 
Gene Names: MND2, YIR025W
UniProt
Find proteins for P40577 (Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
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Entity ID: 12
MoleculeChains Sequence LengthOrganismDetailsImage
Anaphase-promoting complex subunit 4P [auth Q]652Saccharomyces cerevisiaeMutation(s): 0 
Gene Names: APC4, YDR118W
UniProt
Find proteins for Q04601 (Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
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Entity ID: 13
MoleculeChains Sequence LengthOrganismDetailsImage
Anaphase-promoting complex subunit DOC1Q [auth A]250Saccharomyces cerevisiaeMutation(s): 0 
Gene Names: DOC1, APC10, YGL240W, HRC283
UniProt
Find proteins for P53068 (Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
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Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 5.40 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 
EM Software:
TaskSoftware PackageVersion
MODEL REFINEMENTPHENIX
RECONSTRUCTIONRELION

Structure Validation

View Full Validation Report



View more in-depth experimental data
Entry History & Funding Information

Deposition Data

Funding OrganizationLocationGrant Number
Medical Research Council (MRC, United Kingdom)United KingdomMC_UP_1201/6
Cancer Research UKUnited KingdomC576/A14109

Revision History  (Full details and data files)

  • Version 1.0: 2022-08-31
    Type: Initial release
  • Version 1.1: 2024-11-13
    Changes: Data collection, Structure summary