Crystal structure of CBP bromodomain liganded with Y08175
Xiang, Q., Wang, C., Wu, T., Zhang, Y., Zhang, C., Luo, G., Wu, X., Shen, H., Xu, Y.To be published.
Experimental Data Snapshot
Starting Model: experimental
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Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Isoform 2 of CREB-binding protein | 136 | Homo sapiens | Mutation(s): 0  Gene Names: CREBBP, CBP EC: 2.3.1.48 (PDB Primary Data), 2.3.1 (PDB Primary Data) | ||
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for Q92793 (Homo sapiens) Explore Q92793  Go to UniProtKB:  Q92793 | |||||
PHAROS:  Q92793 GTEx:  ENSG00000005339  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q92793 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 3 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
EJ3 (Subject of Investigation/LOI) Query on EJ3 | B [auth A] | 3-[(1-ethanoyl-5-methoxy-indol-3-yl)carbonylamino]-4-fluoranyl-5-(1-methylpyrazol-4-yl)benzoic acid C23 H19 F N4 O5 RCPJEOKKJODBRQ-UHFFFAOYSA-N | |||
GOL Query on GOL | D [auth A], E [auth A] | GLYCEROL C3 H8 O3 PEDCQBHIVMGVHV-UHFFFAOYSA-N | |||
DMS Query on DMS | C [auth A] | DIMETHYL SULFOXIDE C2 H6 O S IAZDPXIOMUYVGZ-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 56.89 | α = 90 |
b = 56.89 | β = 90 |
c = 80.62 | γ = 120 |
Software Name | Purpose |
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Aimless | data scaling |
REFMAC | refinement |
PDB_EXTRACT | data extraction |
iMOSFLM | data reduction |
MOLREP | phasing |
Funding Organization | Location | Grant Number |
---|---|---|
National Natural Science Foundation of China (NSFC) | China | 22007088 |