7VWP | pdb_00007vwp

Structure of the flavin-dependent monooxygenase FlsO1 from the biosynthesis of fluostatinsin

PDB DOI: https://doi.org/10.2210/pdb7VWP/pdb

Classification: OXIDOREDUCTASE
Organism(s): Micromonospora rosaria
Expression System: Escherichia coli BL21(DE3)
Mutation(s): Yes

Deposited: 2021-11-11 Released: 2022-09-21
Deposition Author(s): Zhang, Y., Yang, C., Zhang, L., Zhang, C.
Funding Organization(s): National Natural Science Foundation of China (NSFC)

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.30 Å
R-Value Free:
0.271 (Depositor), 0.242 (DCC)
R-Value Work:
0.211 (Depositor)

Starting Model: experimental
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wwPDB Validation 3D Report Full Report

Ligand Structure Quality Assessment

This is version 1.1 of the entry. See complete history.

Literature

Biochemical and structural insights of multifunctional flavin-dependent monooxygenase FlsO1-catalyzed unexpected xanthone formation

Yang, C., Zhang, L., Zhang, W., Huang, C., Zhu, Y., Jiang, X., Liu, W., Zhao, M., De, B.C., Zhang, C.

(2022) Nat Commun 13: 5386

DOI: https://doi.org/10.1038/s41467-022-33131-0

Macromolecule Content

Total Structure Weight: 217.6 kDa
Atom Count: 15,743
Modeled Residue Count: 1,926
Deposited Residue Count: 1,988
Unique protein chains: 1

Macromolecules

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| 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
FlsO1	A [auth D], B [auth A], C [auth B], D [auth C]	497	Micromonospora rosaria	Mutation(s): 2
UniProt
Find proteins for A0A136PK59 (Micromonospora rosaria) Explore A0A136PK59 Go to UniProtKB: A0A136PK59
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	A0A136PK59
Sequence Annotations Expand
Reference Sequence

Small Molecules

Ligands 3 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram	3D Interactions
FAD (Subject of Investigation/LOI) Query on FAD Download:Ideal Coordinates CCD File SDF format, chain G [auth D] SDF format, chain L [auth A] SDF format, chain U [auth B] SDF format, chain W [auth C] MOL2 format, chain G [auth D] MOL2 format, chain L [auth A] MOL2 format, chain U [auth B] MOL2 format, chain W [auth C] mmCIF format, chain G [auth D] mmCIF format, chain L [auth A] mmCIF format, chain U [auth B] mmCIF format, chain W [auth C]	G [auth D], L [auth A], U [auth B], W [auth C]	FLAVIN-ADENINE DINUCLEOTIDE C₂₇ H₃₃ N₉ O₁₅ P₂ VWWQXMAJTJZDQX-UYBVJOGSSA-N		Interactions Focus chain G [auth D] Focus chain L [auth A] Focus chain U [auth B] Focus chain W [auth C] Interactions & Density Focus chain G [auth D] Focus chain L [auth A] Focus chain U [auth B] Focus chain W [auth C]
PO4 Query on PO4 Download:Ideal Coordinates CCD File SDF format, chain F [auth D] SDF format, chain H [auth A] SDF format, chain I [auth A] SDF format, chain J [auth A] SDF format, chain K [auth A] SDF format, chain M [auth B] SDF format, chain N [auth B] SDF format, chain O [auth B] SDF format, chain P [auth B] SDF format, chain Q [auth B] SDF format, chain R [auth B] SDF format, chain S [auth B] SDF format, chain V [auth C] SDF format, chain E [auth D] MOL2 format, chain F [auth D] MOL2 format, chain H [auth A] MOL2 format, chain I [auth A] MOL2 format, chain J [auth A] MOL2 format, chain K [auth A] MOL2 format, chain M [auth B] MOL2 format, chain N [auth B] MOL2 format, chain O [auth B] MOL2 format, chain P [auth B] MOL2 format, chain Q [auth B] MOL2 format, chain R [auth B] MOL2 format, chain S [auth B] MOL2 format, chain V [auth C] MOL2 format, chain E [auth D] mmCIF format, chain F [auth D] mmCIF format, chain H [auth A] mmCIF format, chain I [auth A] mmCIF format, chain J [auth A] mmCIF format, chain K [auth A] mmCIF format, chain M [auth B] mmCIF format, chain N [auth B] mmCIF format, chain O [auth B] mmCIF format, chain P [auth B] mmCIF format, chain Q [auth B] mmCIF format, chain R [auth B] mmCIF format, chain S [auth B] mmCIF format, chain V [auth C] mmCIF format, chain E [auth D]	E [auth D] F [auth D] H [auth A] I [auth A] J [auth A] E [auth D], F [auth D], H [auth A], I [auth A], J [auth A], K [auth A], M [auth B], N [auth B], O [auth B], P [auth B], Q [auth B], R [auth B], S [auth B], V [auth C]	PHOSPHATE ION O₄ P NBIIXXVUZAFLBC-UHFFFAOYSA-K		Interactions Focus chain E [auth D] Focus chain F [auth D] Focus chain H [auth A] Focus chain I [auth A] Focus chain J [auth A] Focus chain K [auth A] Focus chain M [auth B] Focus chain N [auth B] Focus chain O [auth B] Focus chain P [auth B] Focus chain Q [auth B] Focus chain R [auth B] Focus chain S [auth B] Focus chain V [auth C] Interactions & Density Focus chain E [auth D] Focus chain F [auth D] Focus chain H [auth A] Focus chain I [auth A] Focus chain J [auth A] Focus chain K [auth A] Focus chain M [auth B] Focus chain N [auth B] Focus chain O [auth B] Focus chain P [auth B] Focus chain Q [auth B] Focus chain R [auth B] Focus chain S [auth B] Focus chain V [auth C]
NA Query on NA Download:Ideal Coordinates CCD File SDF format, chain T [auth B] MOL2 format, chain T [auth B] mmCIF format, chain T [auth B]	T [auth B]	SODIUM ION Na FKNQFGJONOIPTF-UHFFFAOYSA-N		Interactions Focus chain T [auth B] Interactions & Density Focus chain T [auth B]