The tandem SH2 domains of SYK
Bradshaw, W.J., Katis, V.L., Chen, Z., Bountra, C., von Delft, F., Gileadi, O., Brennan, P.E.To be published.
Experimental Data Snapshot
wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Tyrosine-protein kinase SYK | 265 | Homo sapiens | Mutation(s): 0  Gene Names: SYK EC: 2.7.10.2 | ||
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P43405 (Homo sapiens) Explore P43405  Go to UniProtKB:  P43405 | |||||
PHAROS:  P43405 GTEx:  ENSG00000165025  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P43405 | ||||
Sequence AnnotationsExpand | |||||
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Find similar proteins by: Sequence | 3D Structure
Entity ID: 2 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
High affinity immunoglobulin epsilon receptor subunit gamma | 20 | Homo sapiens | Mutation(s): 0  | ||
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P30273 (Homo sapiens) Explore P30273  Go to UniProtKB:  P30273 | |||||
PHAROS:  P30273 GTEx:  ENSG00000158869  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P30273 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 3 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
PEG Query on PEG | R [auth BBB], Z [auth EEE] | DI(HYDROXYETHYL)ETHER C4 H10 O3 MTHSVFCYNBDYFN-UHFFFAOYSA-N | |||
PO4 Query on PO4 | M [auth AAA] N [auth AAA] P [auth BBB] Q [auth BBB] S [auth CCC] | PHOSPHATE ION O4 P NBIIXXVUZAFLBC-UHFFFAOYSA-K | |||
EDO Query on EDO | O [auth AAA], U [auth CCC], V [auth CCC] | 1,2-ETHANEDIOL C2 H6 O2 LYCAIKOWRPUZTN-UHFFFAOYSA-N |
Modified Residues 1 Unique | |||||
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ID | Chains | Type | Formula | 2D Diagram | Parent |
PTR Query on PTR | G [auth GGG] H [auth HHH] I [auth III] J [auth JJJ] K [auth KKK] G [auth GGG], H [auth HHH], I [auth III], J [auth JJJ], K [auth KKK], L [auth LLL] | L-PEPTIDE LINKING | C9 H12 N O6 P | TYR |
Length ( Å ) | Angle ( ˚ ) |
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a = 144.136 | α = 90 |
b = 88.035 | β = 113.575 |
c = 158.486 | γ = 90 |
Software Name | Purpose |
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REFMAC | refinement |
DIALS | data reduction |
Aimless | data scaling |
PHASER | phasing |
Funding Organization | Location | Grant Number |
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National Institutes of Health/National Institute on Aging (NIH/NIA) | United States | 5U54AG065187-03 |