7F7N | pdb_00007f7n

Solution structure of apo-WhiB4 from Mycobacterium tuberculosis

PDB DOI: https://doi.org/10.2210/pdb7F7N/pdb
BMRB: 36426

Classification: DNA BINDING PROTEIN
Organism(s): Mycobacterium tuberculosis H37Rv
Expression System: Escherichia coli
Mutation(s): No

Deposited: 2021-06-30 Released: 2021-11-10
Deposition Author(s): Xia, B., Duan, B.
Funding Organization(s): Ministry of Science and Technology (MoST, China), National Natural Science Foundation of China (NSFC)

Experimental Data Snapshot

Method: SOLUTION NMR
Conformers Calculated: 100
Conformers Submitted: 20
Selection Criteria: structures with the lowest energy

wwPDB Validation 3D Report Full Report

Validation slider image for 7F7N

This is version 1.2 of the entry. See complete history.

Literature

DNA binding mechanism of WhiB4 from Mycobacterium tuberculosis

Zhai, Q., Duan, B., Lin, C., Liu, J., Zhang, L., Xia, B.

(2022) Magn Reson Lett 2: 17-27

DOI: https://doi.org/10.1016/j.mrl.2021.100010

Macromolecule Content

Total Structure Weight: 14.31 kDa
Atom Count: 1,001
Modeled Residue Count: 126
Deposited Residue Count: 126
Unique protein chains: 1

Macromolecules

Find similar proteins by:

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Transcriptional regulator WhiB4	A	126	Mycobacterium tuberculosis H37Rv	Mutation(s): 0 Gene Names: whiB4, Rv3681c
UniProt
Find proteins for P9WF39 (Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)) Explore P9WF39 Go to UniProtKB: P9WF39
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	P9WF39
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: SOLUTION NMR
Conformers Calculated: 100
Conformers Submitted: 20
Selection Criteria: structures with the lowest energy

Structure Validation

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Entry History

& Funding Information

Deposition Data

Released Date: 2021-11-10

Deposition Author(s):

Funding Organization	Location	Grant Number
Ministry of Science and Technology (MoST, China)	China	2016YFA0501202
National Natural Science Foundation of China (NSFC)	China	31570734

Revision History (Full details and data files)

Version 1.0: 2021-11-10
Type: Initial release
Version 1.1: 2022-06-01
Changes: Database references
Version 1.2: 2024-05-15
Changes: Data collection, Database references

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.