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Solution structure of apo-WhiB4 from Mycobacterium tuberculosis
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D 1H-13C HSQC 0.4 mM [U-100% 13C; U-100% 15N] WhiB4 95% H2O/5% D2O 50 mM NaCl mM 7 1 atm 298 Bruker AVANCE III HD 950 2 2D 1H-15N HSQC 0.4 mM [U-100% 13C; U-100% 15N] WhiB4 95% H2O/5% D2O 50 mM NaCl mM 7 1 atm 298 Bruker AVANCE III HD 950 3 3D HNCACB 0.4 mM [U-100% 13C; U-100% 15N] WhiB4 95% H2O/5% D2O 50 mM NaCl mM 7 1 atm 298 Bruker AVANCE III HD 700 4 3D CBCA(CO)NH 0.4 mM [U-100% 13C; U-100% 15N] WhiB4 95% H2O/5% D2O 50 mM NaCl mM 7 1 atm 298 Bruker AVANCE III HD 700 5 3D CCHCOSY 0.4 mM [U-100% 13C; U-100% 15N] WhiB4 95% H2O/5% D2O 50 mM NaCl mM 7 1 atm 298 Bruker AVANCE III HD 700 7 3D 1H-15N NOESY 0.4 mM [U-100% 13C; U-100% 15N] WhiB4 95% H2O/5% D2O 50 mM NaCl mM 7 1 atm 298 Bruker AVANCE III HD 950 6 3D 1H-13C NOESY 0.4 mM [U-100% 13C; U-100% 15N] WhiB4 95% H2O/5% D2O 50 mM NaCl mM 7 1 atm 298 Bruker AVANCE III HD 950
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE III HD 700 2 Bruker AVANCE III HD 950
NMR Refinement Method Details Software molecular dynamics Amber
NMR Ensemble Information Conformer Selection Criteria structures with the lowest energy Conformers Calculated Total Number 100 Conformers Submitted Total Number 20 Representative Model 1 (lowest energy)
Computation: NMR Software # Classification Version Software Name Author 1 refinement SANE Duggan, Legge, Dyson & Wright 2 structure calculation Amber Case, Darden, Cheatham III, Simmerling, Wang, Duke, Luo, ... and Kollman 3 chemical shift assignment NMRPipe Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax 4 peak picking NMRView Johnson, One Moon Scientific