7CA4 | pdb_00007ca4

The Crystal Structure of human Bcl-2-like protein 1 from Biortus

• PDB DOI: https://doi.org/10.2210/pdb7CA4/pdb

• Classification: APOPTOSIS
• Organism(s): Homo sapiens
• Expression System: Escherichia coli
• Mutation(s): No 


• Deposited: 2020-06-08 Released: 2020-07-08 
• Deposition Author(s): Wang, F., Lv, Z., Lin, D., Huang, Y.

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Experimental Data Snapshot

• Method: X-RAY DIFFRACTION
• Resolution: 2.70 Å
• R-Value Free: 
  0.228 (Depositor), 0.236 (DCC) 
• R-Value Work: 
  0.198 (Depositor), 0.205 (DCC) 

Starting Model: experimental

Literature

The Crystal Structure of human Bcl-2-like protein 1 from Biortus.

Wang, F., Lv, Z., Lin, D., Huang, Y.

To be published.

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 1 assigned by authors and generated by PISA (software)

Biological Assembly Evidence: gel filtration

Macromolecule Content 

• Total Structure Weight: 25.95 kDa 
• Atom Count: 1,206 
• Modeled Residue Count: 143 
• Deposited Residue Count: 228 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Bcl-2-like protein 1	A	228	Homo sapiens	Mutation(s): 0  Gene Names: BCL2L1, BCL2L, BCLX
UniProt & NIH Common Fund Data Resources
Find proteins for Q07817 (Homo sapiens) Explore Q07817  Go to UniProtKB:  Q07817
PHAROS:  Q07817 GTEx:  ENSG00000171552

Small Molecules

Ligands 1 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram
SO4	B [auth A], C [auth A], D [auth A]	SULFATE ION O4 S QAOWNCQODCNURD-UHFFFAOYSA-L

Experimental Data & Validation

Experimental Data

• Method: X-RAY DIFFRACTION
• Resolution: 2.70 Å
• R-Value Free:  0.228 (Depositor), 0.236 (DCC) 
• R-Value Work:  0.198 (Depositor), 0.205 (DCC) 

Space Group: P 4₁ 2₁ 2

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 63.213	α = 90
b = 63.213	β = 90
c = 111.009	γ = 90

Software Package:

Software Name	Purpose
REFMAC	refinement
HKL-3000	data reduction
HKL-3000	data scaling
PHASER	phasing

Structure Validation

Entry History 

Deposition Data

• Released Date: 2020-07-08 
Deposition Author(s): Wang, F., Lv, Z., Lin, D., Huang, Y.

Revision History  

• Version 1.0: 2020-07-08
  Type: Initial release
  
• Version 1.1: 2022-02-09
  Changes: Database references, Structure summary
• Version 1.2: 2023-11-29
  Changes: Data collection, Derived calculations, Refinement description