7ALP

Severe fever with thrombocytopenia syndrome virus (Phenuiviridae) L protein

PDB DOI: https://doi.org/10.2210/pdb7ALP/pdb
EM Map EMD-0828: EMDB EMDataResource

Classification: VIRAL PROTEIN
Organism(s): Phlebovirus WCH/97/HN/China/2011
Expression System: Spodoptera frugiperda
Mutation(s): No

Deposited: 2020-10-07 Released: 2021-04-21
Deposition Author(s): Cusack, S., Rosenthal, M.
Funding Organization(s): Leibniz Association

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.40 Å
Aggregation State: PARTICLE
Reconstruction Method: SINGLE PARTICLE

wwPDB Validation 3D Report Full Report

This is version 1.1 of the entry. See complete history.

Literature

Errors in the deposited SFTSV L protein structure.

Cusack, S., Rosenthal, M.

(2021) Nat Microbiol 6: 549-550

PubMed: 33927385 Search on PubMed
DOI: https://doi.org/10.1038/s41564-021-00901-3
Primary Citation of Related Structures:
7ALP

Organizational Affiliation

European Molecular Biology Laboratory, Grenoble, France. cusack@embl.fr.

Macromolecule Content

Total Structure Weight: 235.76 kDa
Atom Count: 15,398
Modelled Residue Count: 1,935
Deposited Residue Count: 2,084
Unique protein chains: 1

Macromolecules

Find similar proteins by:

(by identity cutoff) | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Replicase	A [auth U]	2,084	Phlebovirus WCH/97/HN/China/2011	Mutation(s): 0 EC: 2.7.7.48
UniProt
Find proteins for I0DF35 (Dabie bandavirus) Explore I0DF35 Go to UniProtKB: I0DF35
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	I0DF35
Sequence Annotations Expand
Reference Sequence

Small Molecules

Ligands 1 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram	3D Interactions
MG Query on MG Download Ideal Coordinates CCD File SDF format, chain B [auth U] SDF format, chain C [auth U] MOL2 format, chain B [auth U] MOL2 format, chain C [auth U]	B [auth U], C [auth U]	MAGNESIUM ION Mg JLVVSXFLKOJNIY-UHFFFAOYSA-N		Interactions Focus chain B [auth U] Focus chain C [auth U] Interactions & Density Focus chain B [auth U] Focus chain C [auth U]

Experimental Data & Validation

Experimental Data

Method: ELECTRON MICROSCOPY
Resolution: 3.40 Å
Aggregation State: PARTICLE
Reconstruction Method: SINGLE PARTICLE

Structure Validation

View Full Validation Report

Entry History & Funding Information

Deposition Data

Released Date: 2021-04-21

Deposition Author(s):

Funding Organization	Location	Grant Number
Leibniz Association	Germany	K27/2017

Revision History (Full details and data files)

Version 1.0: 2021-04-21
Type: Initial release
Version 1.1: 2021-05-12
Changes: Database references

RCSB PDB Core Operations are funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.