Dinoroseobacter shibae IscR homolog acts as a repressor for iron acquisition genes
Ploetzky, L., Maass, H., Behringer, M., Lukat, P., Blankenfeldt, W., Jahn, D., Haertig, E.To be published.
Experimental Data Snapshot
Starting Model: experimental
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wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
HTH-type transcriptional regulator | 184 | Dinoroseobacter shibae DFL 12 = DSM 16493 | Mutation(s): 0  Gene Names: iscR, Dshi_1633 | ![]() | |
UniProt | |||||
Find proteins for A8LL11 (Dinoroseobacter shibae (strain DSM 16493 / NCIMB 14021 / DFL 12)) Explore A8LL11  Go to UniProtKB:  A8LL11 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | A8LL11 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 2 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
SO4 Query on SO4 | C [auth A] D [auth A] F [auth A] G [auth A] H [auth A] | SULFATE ION O4 S QAOWNCQODCNURD-UHFFFAOYSA-L | |||
GOL Query on GOL | E [auth A] | GLYCEROL C3 H8 O3 PEDCQBHIVMGVHV-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 70.971 | α = 90 |
b = 70.971 | β = 90 |
c = 149.908 | γ = 120 |
Software Name | Purpose |
---|---|
PHENIX | refinement |
autoPROC | data processing |
XDS | data reduction |
Aimless | data scaling |
PDB_EXTRACT | data extraction |
PHASER | phasing |
Funding Organization | Location | Grant Number |
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Not funded | -- |