7ZAN | pdb_00007zan

Crystal Structure of human IL-17A in complex with IL-17RA and IL-17RC


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 5.06 Å
  • R-Value Free: 
    0.353 (Depositor), 0.387 (DCC) 
  • R-Value Work: 
    0.294 (Depositor), 0.317 (DCC) 
  • R-Value Observed: 
    0.297 (Depositor) 

Starting Models: experimental
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Ligand Structure Quality Assessment 


This is version 1.3 of the entry. See complete history

Literature

IL-17-induced dimerization of IL-17RA drives the formation of the IL-17 signalosome to potentiate signaling.

Goepfert, A.Barske, C.Lehmann, S.Wirth, E.Willemsen, J.Gudjonsson, J.E.Ward, N.L.Sarkar, M.K.Hemmig, R.Kolbinger, F.Rondeau, J.M.

(2022) Cell Rep 41: 111489-111489

  • DOI: https://doi.org/10.1016/j.celrep.2022.111489
  • Primary Citation Related Structures: 
    5N9B, 7ZAN

  • PubMed Abstract: 

    Signaling through innate immune receptors such as the Toll-like receptor (TLR)/interleukin-1 receptor (IL-1R) superfamily proceeds via the assembly of large membrane-proximal complexes or "signalosomes." Although structurally distinct, the IL-17 receptor family triggers cellular responses that are typical of innate immune receptors. The IL-17RA receptor subunit is shared by several members of the IL-17 family. Using a combination of crystallographic, biophysical, and mutational studies, we show that IL-17A, IL-17F, and IL-17A/F induce IL-17RA dimerization. X-ray analysis of the heteromeric IL-17A complex with the extracellular domains of the IL-17RA and IL-17RC receptors reveals that cytokine-induced IL-17RA dimerization leads to the formation of a 2:2:2 hexameric signaling assembly. Furthermore, we demonstrate that the formation of the IL-17 signalosome potentiates IL-17-induced IL-36γ and CXCL1 mRNA expression in human keratinocytes, compared with a dimerization-defective IL-17RA variant.


  • Organizational Affiliation
    • Novartis Institutes for BioMedical Research, Novartis Pharma AG, 4002 Basel, Switzerland.

Macromolecule Content 

  • Total Structure Weight: 113.87 kDa 
  • Atom Count: 7,417 
  • Modeled Residue Count: 921 
  • Deposited Residue Count: 991 
  • Unique protein chains: 3

Macromolecules

Find similar proteins by:|  3D Structure
Entity ID: 1
MoleculeChains  Sequence LengthOrganismDetailsImage
Interleukin-17A
A, B
123Homo sapiensMutation(s): 2 
Gene Names: IL17ACTLA8IL17
UniProt & NIH Common Fund Data Resources
Find proteins for Q16552 (Homo sapiens)
Explore Q16552 
Go to UniProtKB:  Q16552
PHAROS:  Q16552
GTEx:  ENSG00000112115 
Entity Groups
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ16552
Sequence Annotations
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Reference Sequence
Find similar proteins by:|  3D Structure
Entity ID: 2
MoleculeChains  Sequence LengthOrganismDetailsImage
Interleukin-17 receptor A292Homo sapiensMutation(s): 3 
Gene Names: IL17RAIL17R
UniProt & NIH Common Fund Data Resources
Find proteins for Q96F46 (Homo sapiens)
Explore Q96F46 
Go to UniProtKB:  Q96F46
PHAROS:  Q96F46
GTEx:  ENSG00000177663 
Entity Groups
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ96F46
Glycosylation
Glycosylation Sites: 1Go to GlyGen: Q96F46-1
Sequence Annotations
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Reference Sequence
Find similar proteins by:|  3D Structure
Entity ID: 3
MoleculeChains  Sequence LengthOrganismDetailsImage
Isoform 2 of Interleukin-17 receptor C453Homo sapiensMutation(s): 0 
Gene Names: IL17RCUNQ6118/PRO20040/PRO38901
UniProt & NIH Common Fund Data Resources
Find proteins for Q8NAC3 (Homo sapiens)
Explore Q8NAC3 
Go to UniProtKB:  Q8NAC3
PHAROS:  Q8NAC3
GTEx:  ENSG00000163702 
Entity Groups
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ8NAC3
Glycosylation
Glycosylation Sites: 3Go to GlyGen: Q8NAC3-1
Sequence Annotations
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Reference Sequence

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 5.06 Å
  • R-Value Free:  0.353 (Depositor), 0.387 (DCC) 
  • R-Value Work:  0.294 (Depositor), 0.317 (DCC) 
  • R-Value Observed: 0.297 (Depositor) 
Space Group: P 65 2 2
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 186.305α = 90
b = 186.305β = 90
c = 238.305γ = 120
Software Package:
Software NamePurpose
BUSTERrefinement
XDSdata reduction
Aimlessdata scaling
PHASERphasing
PDB_EXTRACTdata extraction

Structure Validation

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Ligand Structure Quality Assessment 


Entry History 

& Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
Not funded--

Revision History  (Full details and data files)

  • Version 1.0: 2022-10-12
    Type: Initial release
  • Version 1.1: 2022-11-02
    Changes: Database references
  • Version 1.2: 2024-01-31
    Changes: Data collection, Refinement description
  • Version 1.3: 2024-10-16
    Changes: Structure summary