Download MendeleyEfficient Screening of Target-Specific Selected Compounds in Mixtures by 19 F NMR Binding Assay with Predicted 19 F NMR Chemical Shifts.
Vulpetti, A., Lingel, A., Dalvit, C., Schiering, N., Oberer, L., Henry, C., Lu, Y.(2022) ChemMedChem 17: e202200163-e202200163
- PubMed: 35475323 Search on PubMed
- DOI: https://doi.org/10.1002/cmdc.202200163
- Primary Citation Related Structures:
7Z25, 7Z2I - PubMed Abstract:
Ligand-based 19 F NMR screening is a highly effective and well-established hit-finding approach. The high sensitivity to protein binding makes it particularly suitable for fragment screening. Different criteria can be considered for generating fluorinated fragment libraries. One common strategy is to assemble a large, diverse, well-designed and characterized fragment library which is screened in mixtures, generated based on experimental 19 F NMR chemical shifts. Here, we introduce a complementary knowledge-based 19 F NMR screening approach, named 19 Focused screening, enabling the efficient screening of putative active molecules selected by computational hit finding methodologies, in mixtures assembled and on-the-fly deconvoluted based on predicted 19 F NMR chemical shifts. In this study, we developed a novel approach, named LEFshift, for 19 F NMR chemical shift prediction using rooted topological fluorine torsion fingerprints in combination with a random forest machine learning method. A demonstration of this approach to a real test case is reported.
- Novartis Institutes for BioMedical Research, 4002, Basel, Switzerland.
Organizational Affiliation:
