7YIC | pdb_00007yic

Crystal structure of reductase LSADH

PDB DOI: https://doi.org/10.2210/pdb7YIC/pdb

Classification: OXIDOREDUCTASE
Organism(s): Leifsonia sp. S749
Expression System: Escherichia coli 'BL21-Gold(DE3)pLysS AG
Mutation(s): No

Deposited: 2022-07-15 Released: 2022-11-02
Deposition Author(s): Tang, J., Liuqing, C.
Funding Organization(s): Other private

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.16 Å
R-Value Free:
0.324 (Depositor), 0.302 (DCC)
R-Value Work:
0.296 (Depositor)
R-Value Observed:
0.297 (Depositor)

Starting Model: experimental
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wwPDB Validation 3D Report Full Report

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This is version 1.1 of the entry. See complete history.

Literature

crystal structure of reductase LSADH

Tang, J., Liuqing, C.

To be published.

Macromolecule Content

Total Structure Weight: 49.77 kDa
Atom Count: 3,518
Modeled Residue Count: 500
Deposited Residue Count: 500
Unique protein chains: 1

Macromolecules

Find similar proteins by:

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Short chain alcohol dehydrogenase	A, B	250	Leifsonia sp. S749	Mutation(s): 0 Gene Names: lsadh
UniProt
Find proteins for Q4R1E0 (Leifsonia sp. S749) Explore Q4R1E0 Go to UniProtKB: Q4R1E0
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	Q4R1E0
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 2.16 Å
R-Value Free: 0.324 (Depositor), 0.302 (DCC)
R-Value Work: 0.296 (Depositor)
R-Value Observed: 0.297 (Depositor)

Space Group: C 2 2 2₁

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 69.28	α = 90
b = 109.928	β = 90
c = 120.668	γ = 90

Software Package:

Software Name	Purpose
REFMAC	refinement
xia2	data reduction
xia2	data scaling
MOLREP	phasing

Structure Validation

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Entry History

& Funding Information

Deposition Data

Released Date: 2022-11-02

Deposition Author(s):

Funding Organization	Location	Grant Number
Other private		--

Revision History (Full details and data files)

Version 1.0: 2022-11-02
Type: Initial release
Version 1.1: 2023-11-29
Changes: Data collection, Refinement description

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.