The crystal structure of human Calpain-1 protease core in complex with 14a
Zhao, Y., Zhao, J., Shao, M., Yang, H., Rao, Z.To be published.
Experimental Data Snapshot
Starting Model: experimental
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Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Calpain-1 catalytic subunit | 714 | Homo sapiens | Mutation(s): 0  Gene Names: CAPN1, CANPL1, PIG30 EC: 3.4.22.52 | ![]() | |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P07384 (Homo sapiens) Explore P07384  Go to UniProtKB:  P07384 | |||||
PHAROS:  P07384 GTEx:  ENSG00000014216  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P07384 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 3 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
89K (Subject of Investigation/LOI) Query on 89K | B [auth A] | N-[(2S)-3-cyclohexyl-1-oxidanylidene-1-[[(2S,3S)-3-oxidanyl-4-oxidanylidene-1-[(3S)-2-oxidanylidenepiperidin-3-yl]-4-[(phenylmethyl)amino]butan-2-yl]amino]propan-2-yl]-1-benzofuran-2-carboxamide C34 H42 N4 O6 QBWBVQMSMXVSSF-YRUYCOJQSA-N | |||
CA Query on CA | D [auth A], E [auth A] | CALCIUM ION Ca BHPQYMZQTOCNFJ-UHFFFAOYSA-N | |||
H2S Query on H2S | C [auth A] | HYDROSULFURIC ACID H2 S RWSOTUBLDIXVET-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 50.203 | α = 90 |
b = 64.07 | β = 90 |
c = 99.576 | γ = 90 |
Software Name | Purpose |
---|---|
PHENIX | refinement |
XSCALE | data scaling |
PDB_EXTRACT | data extraction |
XDS | data reduction |
PHASER | phasing |
Funding Organization | Location | Grant Number |
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National Natural Science Foundation of China (NSFC) | China | 813300237 |