7X72

SFTSV 5 fold pentamer

• PDB DOI: https://doi.org/10.2210/pdb7X72/pdb
• EM Map EMD-33030: EMDB EMDataResource

• Classification: VIRAL PROTEIN
• Organism(s): Severe fever with thrombocytopenia syndrome virus
• Mutation(s): No 


• Deposited: 2022-03-08 Released: 2023-08-16 
• Deposition Author(s): Sun, Z., Lou, Z.
• Funding Organization(s): National Natural Science Foundation of China (NSFC)

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Experimental Data Snapshot

• Method: ELECTRON MICROSCOPY
• Resolution: 7.20 Å
• Aggregation State: PARTICLE 
• Reconstruction Method: SINGLE PARTICLE 

Literature

Architecture of severe fever with thrombocytopenia syndrome virus.

Sun, Z., Cheng, J., Bai, Y., Cao, L., Xie, D., Deng, F., Zhang, X., Rao, Z., Lou, Z.

(2023) Protein Cell 14: 914-918

• PubMed: 37038326 
• DOI: https://doi.org/10.1093/procel/pwad019
• Primary Citation of Related Structures:  
  7X6U, 7X6W, 7X72

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Organizational Affiliation: 

Department of Basic Research, Guangzhou Laboratory, Guangzhou 510005, China.

Biological Assembly 1  

Global Symmetry: Cyclic - C5  (Explore in 3D)
Global Stoichiometry: Hetero 10-mer - A5B5 

Biological assembly 1 assigned by authors and generated by (software)

Biological Assembly Evidence: electron microscopy

Macromolecule Content

• Total Structure Weight: 117.26 kDa 
• Atom Count: 6,339 
• Modelled Residue Count: 865 
• Deposited Residue Count: 1,073 
• Unique protein chains: 2

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Envelopment polyprotein	A	562	Severe fever with thrombocytopenia syndrome virus	Mutation(s): 0
UniProt
Find proteins for A0A1S6XXI4 (Dabie bandavirus) Explore A0A1S6XXI4  Go to UniProtKB:  A0A1S6XXI4
Glycosylation
Glycosylation Sites: 1

Entity ID: 2
Molecule	Chains	Sequence Length	Organism	Details	Image
Envelopment polyprotein	B	511	Severe fever with thrombocytopenia syndrome virus	Mutation(s): 0
UniProt
Find proteins for A0A1S6XXK1 (Dabie bandavirus) Explore A0A1S6XXK1  Go to UniProtKB:  A0A1S6XXK1

Oligosaccharides

Help

Entity ID: 3
Molecule	Chains	Length	2D Diagram	Glycosylation	3D Interactions
alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose	C [auth D]	3		N-Glycosylation
Glycosylation Resources
GlyTouCan:  G62182OO GlyCosmos:  G62182OO GlyGen:  G62182OO

Experimental Data & Validation

Experimental Data

• Method: ELECTRON MICROSCOPY
• Resolution: 7.20 Å
• Aggregation State: PARTICLE 
• Reconstruction Method: SINGLE PARTICLE 

EM Software:

Task	Software Package	Version
RECONSTRUCTION	RELION
RECONSTRUCTION	RELION

Structure Validation

Entry History & Funding Information

Deposition Data

• Released Date: 2023-08-16 
Deposition Author(s): Sun, Z., Lou, Z.

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Funding Organization	Location	Grant Number
National Natural Science Foundation of China (NSFC)	China	U20A20135

Revision History  

• Version 1.0: 2023-08-16
  Type: Initial release
  
• Version 1.1: 2023-12-13
  Changes: Database references
• Version 1.2: 2024-10-30
  Changes: Data collection, Structure summary