SARS-CoV-2-Omicron-RBD and BD-236-GWP/P-VK antibody complex
Shi, R., Wang, Y., Wu, Z., Han, X., Yan, J.To be published.
Experimental Data Snapshot
Starting Model: experimental
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wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
BD-236 Fab heavy chain | A [auth H] | 223 | Homo sapiens | Mutation(s): 0  | ![]() |
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 2 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
BD-236 Fab light chain | B [auth L] | 215 | Homo sapiens | Mutation(s): 0  | ![]() |
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 3 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Spike protein S1 | C [auth R] | 210 | Severe acute respiratory syndrome coronavirus 2 | Mutation(s): 15  Gene Names: S, 2 | ![]() |
UniProt | |||||
Find proteins for P0DTC2 (Severe acute respiratory syndrome coronavirus 2) Explore P0DTC2  Go to UniProtKB:  P0DTC2 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P0DTC2 | ||||
Sequence AnnotationsExpand | |||||
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Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 86.24 | α = 90 |
b = 146.47 | β = 90 |
c = 145.97 | γ = 90 |
Software Name | Purpose |
---|---|
PHENIX | refinement |
HKL-2000 | data reduction |
HKL-2000 | data scaling |
PHENIX | phasing |
PDB_EXTRACT | data extraction |
Funding Organization | Location | Grant Number |
---|---|---|
Ministry of Science and Technology (MoST, China) | China | -- |
Chinese Academy of Sciences | China | -- |
Ministry of Science and Technology (MoST, China) | China | -- |
National Natural Science Foundation of China (NSFC) | China | -- |