Structure and function of truncated VhChiP
Aunkham, A., Sanram, S., Suginta, W.To be published.
Experimental Data Snapshot
Starting Model: experimental
View more details
Entity ID: 1 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Chitoporin | 331 | Vibrio harveyi | Mutation(s): 0  Gene Names: chiP Membrane Entity: Yes  | ||
UniProt | |||||
Find proteins for L0RVU0 (Vibrio harveyi) Explore L0RVU0  Go to UniProtKB:  L0RVU0 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | L0RVU0 | ||||
Sequence AnnotationsExpand | |||||
|
Ligands 3 Unique | |||||
---|---|---|---|---|---|
ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
DXT Query on DXT | G [auth A], IA [auth F], O [auth B], Y [auth D] | (4S,4AR,5S,5AR,6R,12AS)-4-(DIMETHYLAMINO)-3,5,10,12,12A-PENTAHYDROXY-6-METHYL-1,11-DIOXO-1,4,4A,5,5A,6,11,12A-OCTAHYDROTETRACENE-2-CARBOXAMIDE C22 H24 N2 O8 JBIWCJUYHHGXTC-AKNGSSGZSA-N | |||
C8E (Subject of Investigation/LOI) Query on C8E | AA [auth D] EA [auth E] H [auth A] I [auth A] J [auth A] | (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE C16 H34 O5 FEOZZFHAVXYAMB-UHFFFAOYSA-N | |||
NA Query on NA | BA [auth D] CA [auth D] DA [auth D] FA [auth E] GA [auth E] | SODIUM ION Na FKNQFGJONOIPTF-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 92.393 | α = 101.11 |
b = 92.5 | β = 101.14 |
c = 96.522 | γ = 109.72 |
Software Name | Purpose |
---|---|
PHENIX | refinement |
PDB_EXTRACT | data extraction |
HKL-2000 | data reduction |
HKL-2000 | data scaling |
PHENIX | phasing |
Funding Organization | Location | Grant Number |
---|---|---|
Vidyasirimedhi Institute of Science and Technology (VISTEC) | Thailand | -- |