7WFS | pdb_00007wfs

Acyl-Coenzyme A Binding Protein 103 (LMJF_17_0620) of Leishmania major in triclinic crystal form

PDB DOI: https://doi.org/10.2210/pdb7WFS/pdb

Classification: LIPID BINDING PROTEIN
Organism(s): Leishmania major
Expression System: Escherichia coli BL21
Mutation(s): No

Deposited: 2021-12-27 Released: 2023-02-01
Deposition Author(s): Verma, S., Sundd, M.
Funding Organization(s): Not funded

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 1.40 Å
R-Value Free:
0.265 (Depositor), 0.269 (DCC)
R-Value Work:
0.232 (Depositor), 0.232 (DCC)
R-Value Observed:
0.233 (Depositor)

Starting Model: experimental
View more details

wwPDB Validation 3D Report Full Report

Validation slider image for 7WFS

This is version 1.1 of the entry. See complete history.

Literature

Acyl-Coenzyme A Binding Protein 103 (LMJF_17_0620) of Leishmania major in monoclinic crystal form

Verma, S., Sundd, M.

To be published.

Macromolecule Content

Total Structure Weight: 23.09 kDa
Atom Count: 1,671
Modeled Residue Count: 194
Deposited Residue Count: 208
Unique protein chains: 1

Macromolecules

Find similar proteins by:

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
ACB domain-containing protein	A, B	104	Leishmania major	Mutation(s): 0 Gene Names: LMJF_17_0620
UniProt
Find proteins for Q4QED2 (Leishmania major) Explore Q4QED2 Go to UniProtKB: Q4QED2
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	Q4QED2
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 1.40 Å
R-Value Free: 0.265 (Depositor), 0.269 (DCC)
R-Value Work: 0.232 (Depositor), 0.232 (DCC)
R-Value Observed: 0.233 (Depositor)

Space Group: P 1

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 37.258	α = 89.678
b = 37.98	β = 66.126
c = 45.975	γ = 60.718

Software Package:

Software Name	Purpose
PHENIX	refinement
XDS	data reduction
SCALA	data scaling
PHASER	phasing

Structure Validation

View Full Validation Report

View more in-depth experimental data

Entry History

& Funding Information

Deposition Data

Released Date: 2023-02-01

Deposition Author(s):

Funding Organization	Location	Grant Number
Not funded		--

Revision History (Full details and data files)

Version 1.0: 2023-02-01
Type: Initial release
Version 1.1: 2023-11-29
Changes: Data collection, Refinement description

RCSB PDB is hosted by

RCSB PDB is a member of

RCSB Partners
Nucleic Acid Knowledgebase

CoreTrustSeal

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.