7VSS | pdb_00007vss

Phosphoglucomutase_tlr1976

PDB DOI: https://doi.org/10.2210/pdb7VSS/pdb

Classification: UNKNOWN FUNCTION
Organism(s): Thermosynechococcus vestitus BP-1
Expression System: Escherichia coli
Mutation(s): No

Deposited: 2021-10-27 Released: 2022-11-02
Deposition Author(s): Su, J.Y.
Funding Organization(s): Not funded

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.96 Å
R-Value Free:
0.228 (Depositor), 0.234 (DCC)
R-Value Work:
0.188 (Depositor), 0.200 (DCC)
R-Value Observed:
0.191 (Depositor)

Starting Model: experimental
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This is version 1.1 of the entry. See complete history.

Literature

phosphoglucomutase_tlr1976

Su, J.Y.

To be published.

Macromolecule Content

Total Structure Weight: 58.83 kDa
Atom Count: 3,943
Modeled Residue Count: 514
Deposited Residue Count: 544
Unique protein chains: 1

Macromolecules

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Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Phosphoglucomutase	A	544	Thermosynechococcus vestitus BP-1	Mutation(s): 0 Gene Names: tlr1976 EC: 5.4.2.2
UniProt
Find proteins for Q8DHI3 (Thermosynechococcus vestitus (strain NIES-2133 / IAM M-273 / BP-1)) Explore Q8DHI3 Go to UniProtKB: Q8DHI3
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	Q8DHI3
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 2.96 Å
R-Value Free: 0.228 (Depositor), 0.234 (DCC)
R-Value Work: 0.188 (Depositor), 0.200 (DCC)
R-Value Observed: 0.191 (Depositor)

Space Group: P 4₁ 2₁ 2

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 110.082	α = 90
b = 110.082	β = 90
c = 177.645	γ = 90

Software Package:

Software Name	Purpose
PHENIX	refinement
PDB_EXTRACT	data extraction

Structure Validation

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Entry History

& Funding Information

Deposition Data

Released Date: 2022-11-02

Deposition Author(s):

Funding Organization	Location	Grant Number
Not funded		--

Revision History (Full details and data files)

Version 1.0: 2022-11-02
Type: Initial release
Version 1.1: 2023-11-29
Changes: Data collection, Refinement description

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.