7SPB

Models for C13 reconstruction of Outer Membrane Core Complex (OMCC) of Type IV Secretion System (T4SS) encoded by F-plasmid (pED208).


Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.31 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

wwPDB Validation   3D Report Full Report


This is version 1.1 of the entry. See complete history


Literature

Structure of a type IV secretion system core complex encoded by multi-drug resistance F plasmids

Liu, X.Khara, P.Baker, M.L.Christie, P.J.Hu, B.

(2022) Nat Commun 13: 379


Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
TraV204Salmonella enterica subsp. enterica serovar TyphiMutation(s): 0 
Membrane Entity: Yes 
UniProt
Find proteins for Q8KNL2 (Salmonella typhi)
Explore Q8KNL2 
Go to UniProtKB:  Q8KNL2
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ8KNL2
Sequence Annotations
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  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 2
MoleculeChains Sequence LengthOrganismDetailsImage
TraK246Salmonella enterica subsp. enterica serovar TyphiMutation(s): 0 
Membrane Entity: Yes 
UniProt
Find proteins for Q8KNL8 (Salmonella typhi)
Explore Q8KNL8 
Go to UniProtKB:  Q8KNL8
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ8KNL8
Sequence Annotations
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  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 3
MoleculeChains Sequence LengthOrganismDetailsImage
TraB453Salmonella enterica subsp. enterica serovar TyphiMutation(s): 0 
UniProt
Find proteins for Q8KNL7 (Salmonella typhi)
Explore Q8KNL7 
Go to UniProtKB:  Q8KNL7
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ8KNL7
Sequence Annotations
Expand
  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.31 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 
EM Software:
TaskSoftware PackageVersion
RECONSTRUCTIONcryoSPARC

Structure Validation

View Full Validation Report



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)United States--

Revision History  (Full details and data files)

  • Version 1.0: 2022-02-02
    Type: Initial release
  • Version 1.1: 2024-06-05
    Changes: Data collection