Crystal structure of RCC1-Like domain 2 of ubiquitin ligase HERC2 in complex with DXDKDED motif of Myelin transcription factor 1
Demenge, A., Howard, E., Cousido-Siah, A., Mitschler, A., Podjarny, A., McEwen, A.G., Trave, G.To be published.
Experimental Data Snapshot
Starting Model: experimental
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wwPDB Validation 3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
E3 ubiquitin-protein ligase HERC2 | A, B [auth C], C [auth E] | 405 | Homo sapiens | Mutation(s): 0 Gene Names: HERC2 EC: 2.3.2.26 | ![]() |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for O95714 (Homo sapiens) Explore O95714 Go to UniProtKB: O95714 | |||||
PHAROS: O95714 GTEx: ENSG00000128731 | |||||
Entity Groups | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | O95714 | ||||
Sequence AnnotationsExpand | |||||
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Find similar proteins by: Sequence | 3D Structure
Entity ID: 2 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Myelin transcription factor 1 | D [auth B], E [auth D], F | 14 | Homo sapiens | Mutation(s): 0 | ![]() |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for Q01538 (Homo sapiens) Explore Q01538 Go to UniProtKB: Q01538 | |||||
PHAROS: Q01538 GTEx: ENSG00000196132 | |||||
Entity Groups | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q01538 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 1 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
CIT Query on CIT | G [auth C], H [auth E], I [auth E] | CITRIC ACID C6 H8 O7 KRKNYBCHXYNGOX-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
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a = 108.39 | α = 90 |
b = 108.39 | β = 90 |
c = 242.31 | γ = 90 |
Software Name | Purpose |
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PHENIX | refinement |
PHENIX | refinement |
XDS | data reduction |
XSCALE | data scaling |
PHASER | phasing |
Funding Organization | Location | Grant Number |
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Not funded | -- |